name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_799_curated_1
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..176
|
Transposase IS66 n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WJJ7_9RHIZ
Transposase IS66 {ECO:0000313|EMBL:EEQ95225.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
IS66 insertion sequence transposase
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(293..607)
|
Rcorf104 n=1 Tax=Agrobacterium rhizogenes RepID=Q9F5B4_AGRRH
Rcorf104 {ECO:0000313|EMBL:ABW33661.1}; Riorf138 protein {ECO:0000313|EMBL:BAB16257.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_3
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1422..2639
|
Plasmid partitioning protein RepA n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6EE30_SINMK
plasmid partitioning protein RepA
Plasmid partitioning protein {ECO:0000313|EMBL:AFJ91240.1}; TaxID=382 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_4
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2636..3628
|
Plasmid partitioning protein RepB n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IG79_RHIML
plasmid partitioning protein RepB
Plasmid partitioning protein {ECO:0000313|EMBL:AFJ91241.1}; TaxID=382 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3870..5039
|
Putative replication protein C n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4K1_9RHIZ
Putative replication protein C {ECO:0000313|EMBL:EYR77542.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
repCb1; replication protein C
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5065..6105)
|
Acetylpolyamine aminohydrolase AphA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBT4_9RHIZ
Acetylpolyamine aminohydrolase AphA {ECO:0000313|EMBL:EYR77478.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
histone deacetylase superfamily protein
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_7
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6206..7390)
|
UPI0003CEC522 related cluster n=1 Tax=unknown RepID=UPI0003CEC522
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESY95192.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
ABC-type branched-chain amino acid transport system, periplasmic component
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_8
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7431..8132)
|
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGA4_MESOW
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:AEH90289.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_9
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8133..8834)
|
ABC transporter n=1 Tax=Rhizobium loti RepID=UPI000373379B
ABC transporter family protein {ECO:0000313|EMBL:AID28510.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
putative ABC-type transport system, ATPase component
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_10
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8831..9793)
|
Inner-membrane translocator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGA2_MESOW
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:AEH90287.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_11
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9790..10650)
|
Inner-membrane translocator n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGA1_MESOW
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:AEH90286.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_12
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10650..11777)
|
UPI0003CF2605 related cluster n=1 Tax=unknown RepID=UPI0003CF2605
Histone deacetylase {ECO:0000313|EMBL:ESY98726.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
Histone deacetylase
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_13
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12136..12834
|
Uncharacterized HTH-type transcriptional regulator ydfH n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AER7_RHIFH
HTH-type transcriptional regulator ydfH
Regulatory protein, GntR family {ECO:0000313|EMBL:CCE99549.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_14
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12831..13742
|
dapa3; dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
Dihydrodipicolinate synthetase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XSS7_RHIRD
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EHH06994.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_15
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13735..15252
|
aldehyde dehydrogenase; K09472 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase [EC:1.2.1.-]
Aldehyde Dehydrogenase n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B6A1H7_RHILW
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EJB06128.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_16
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15249..16580
|
Oxidoreductase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JHU1_AGRRK
Putative oxidoreductase {ECO:0000313|EMBL:GAJ93616.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16652..17506
|
ABC transporter, substrate binding protein (Glycine-betaine) n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y496_9RHIZ
ABC transporter, substrate binding protein (Glycine-betaine) {ECO:0000313|EMBL:EHH06991.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
glycine-betaine ABC transporter substrate-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_18
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17597..18646
|
prov3; putative glycine betaine/proline ABC transporter (ATP-binding protein); K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
ABC-type proline/glycine betaine transport system (ATP-binding protein) {ECO:0000313|EMBL:CCE99554.1}; EC=3.6.3.32 {ECO:0000313|EMBL:CCE99554.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Putative glycine betaine/proline ABC transporter (ATP-binding protein) n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AES2_RHIFH
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_19
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18662..19501
|
ABC transporter permease n=1 Tax=Rhizobium giardinii RepID=UPI00037CE7E3
prow3; glycine betaine/L-proline ABC transporter,permease protein; K02001 glycine betaine/proline transport system permease protein
ABC transporter {ECO:0000313|EMBL:EGP54241.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_20
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19498..20010
|
Glycine betaine/L-proline transport system permease protein proW n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AES4_RHIFH
prow5; glycine betaine/L-proline transport system permease protein proW; K02001 glycine betaine/proline transport system permease protein
Glycine betaine/L-proline transport system permease protein {ECO:0000313|EMBL:CCE99556.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19956..20351
|
Putative permease component of ABC transporter n=1 Tax=Pseudomonas putida CSV86 RepID=L1LYP6_PSEPU
Putative permease component of ABC transporter {ECO:0000313|EMBL:EKX83841.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
ABC transporter permease; K02001 glycine betaine/proline transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_22
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20362..21360
|
UPI0003CE7F4C related cluster n=1 Tax=unknown RepID=UPI0003CE7F4C
Hydroxyproline-2-epimerase {ECO:0000313|EMBL:ESY73427.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hydroxyproline-2-epimerase
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_23
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21486..22214
|
GntR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00036F8E42
GntR family transcriptional regulator
Transcriptional regulator GntR family {ECO:0000313|EMBL:ACM39943.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_24
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22221..23567)
|
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AEA5_RHIFH
hypothetical protein
Putative FAD dependent oxidoreductase {ECO:0000313|EMBL:CCE99387.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_25
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23572..24456)
|
dapa1; Dihydrodipicolinate synthase DHDPS; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthetase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036F417B
Putative dihydrodipicolinate synthetase {ECO:0000313|EMBL:CCE99388.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_26
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24679..25392
|
transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00035EC5EF
GntR family transcriptional regulator {ECO:0000313|EMBL:KEC78223.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
HTH-type transcriptional regulator ydfH
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_27
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25395..26393)
|
putative malate dehydrogenase (EC:1.1.1.37)
Putative malate dehydrogenase n=1 Tax=Rhizobium sp. Pop5 RepID=K0VMZ7_9RHIZ
Malate dehydrogenase {ECO:0000313|EMBL:KDP72593.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_28
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26395..28380)
|
stcD1; N-methylproline demethylase StcD (EC:1.-.-.-)
oxidoreductase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003720957
Oxidoreductase {ECO:0000313|EMBL:KDP72594.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_29
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28478..29539)
|
glycine betaine/L-proline ABC transporter ATP-binding protein (EC:3.6.3.32)
Glycine betaine/L-proline ABC transporter ATP-binding protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SFV1_RHIET
Glycine/betaine ABC transporter ATPase {ECO:0000313|EMBL:KDP72595.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_799_curated_30
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29532..29891)
|
Amino acid ABC transporter permease n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DHX3_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KDP72596.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
putative permease component of ABC transporter; K02001 glycine betaine/proline transport system permease protein
|