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SCNpilot_expt_1000_bf_scaffold_1744_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(18260..19672)

Top 3 Functional Annotations

Value Algorithm Source
dld; D-lactate dehydrogenase (cytochrome) protein (EC:1.1.2.4); K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 468.0
  • Bit_score: 730
  • Evalue 4.50e-208
Glycolate oxidase subunit GlcD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXS7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 467.0
  • Bit_score: 769
  • Evalue 2.10e-219
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:EYR81739.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 467.0
  • Bit_score: 769
  • Evalue 3.00e-219

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGCGCTGCAGGATCTGCGCGCGGGCACGCGCAACGAAGAGGGTATCGCCCGGGCAATGGAGAAGCTGAAGGCGCAGTTCGGCGAGCGTTTCCAGACCGGCGAGGCGATACGACACCAGCATGCGCATACGCTGACCTATATTCCCCCGCAGCTTCCCGATGGCGTCGTCTTCGCCGAAAGCGCCGATGACGTGAAAGAGGTGGTGCGCTGCTGCGCCGCCCTGAAGGTGCCGGTCATTCCCTTCGGCACCGGTTCTTCGCTTGAGGGACAGGTGAATGCGCCCTCCGGCGGCATCTCCATCGATTTCTCGAAGATGAATCGCATTCTCTCGGTCAATGCGGAGGATCTCGACTGCACCGTCGAGCCCGGCGTCACCCGTGAGCAGCTCAATGTCCATCTGCGCGACACCGGCCTGTTCTTTCCCATCGATCCCGGCGCCAACGCCTCGATCGGCGGAATGGCCTCGACGCGTGCCTCCGGCACCAATGCCGTGCGCTACGGCACGATGAAGGACAATGTACTCTCGGTAACCGCCGTGACCGCCAGCGGCGAAGAAATCCGCACCGCCCGGCGGGCGCGAAAATCCTCGGCCGGCTATGACCTGACGCGGCTCTTCGTCGGCGCCGAAGGCACGCTCGGTGTCCTGACCTCGGTGACGCTGCGCCTGCAGGGCATTCCGGCCGTCATCGCCGGCGGTGTGTGCGGTTTTCCGACGCTGCGCGATGCCTCCAATGCCGTCATCATGACCATCCAGCTCGGGATTCCCGTGGCCCGGATCGAACTGGTCAATGCGCTGCAGATCCGCGCCTGCAACGCCTATTCCGGCTTGTCGTTGATCGAGCAGCCGACGCTGTTCGTGGAATTCCATGGCAGCGAGGACAGCGTGAAGCTGCAATCTGAGGAATTCTCCGCCGTCGTCGCCGAATGCGGCGGCGGTGCGTTCGACTGGACCAGCGATCCGCAGGCGCGGGCGAAACTCTGGAAGGCGCGCCATGACGTCTATTTCTCCGCCAAGAGCCTTCGCTCCGGCTGCAATGTCATCGCCACCGATGTCTGCGTGCCGATCTCGCGTTTTGCCGATTGCGTCGCCGAGACCGAGGACGACATCAACGCCCATGGCCTGACCGGTCCGATCGTCGGCCATGCCGGCGACGGCAATTTCCATGTCAGCCTGGTGATCGACGATACCGACCCGGCCGAGCTTGCCAAGGCCGAAGCCTTCGTCGCCCGGCTGAACACGCGAGCGCTGGCCATGGACGGCACCTGCACCGGCGAGCATGGCATCGGCCAGGGCAAGATTCCCTATTTGGAACGCGAACTTGGCGGCGCCGTCGATCTCATGCGCCAGGTCAAGCGTGCGCTCGATCCCGACAATATCTTCAACCCCGGAAAAATCTTCCATCTTGATTGA
PROTEIN sequence
Length: 471
MALQDLRAGTRNEEGIARAMEKLKAQFGERFQTGEAIRHQHAHTLTYIPPQLPDGVVFAESADDVKEVVRCCAALKVPVIPFGTGSSLEGQVNAPSGGISIDFSKMNRILSVNAEDLDCTVEPGVTREQLNVHLRDTGLFFPIDPGANASIGGMASTRASGTNAVRYGTMKDNVLSVTAVTASGEEIRTARRARKSSAGYDLTRLFVGAEGTLGVLTSVTLRLQGIPAVIAGGVCGFPTLRDASNAVIMTIQLGIPVARIELVNALQIRACNAYSGLSLIEQPTLFVEFHGSEDSVKLQSEEFSAVVAECGGGAFDWTSDPQARAKLWKARHDVYFSAKSLRSGCNVIATDVCVPISRFADCVAETEDDINAHGLTGPIVGHAGDGNFHVSLVIDDTDPAELAKAEAFVARLNTRALAMDGTCTGEHGIGQGKIPYLERELGGAVDLMRQVKRALDPDNIFNPGKIFHLD*