ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1744_curated_19

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(19748..20413)

Top 3 Functional Annotations

Value Algorithm Source
cell envelope biogenesis protein OmpA n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000372A81B similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 221.0
  • Bit_score: 369
  • Evalue 1.80e-99
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:EJL48956.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 221.0
  • Bit_score: 369
  • Evalue 3.20e-99
OmpA/MotB family outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 221.0
  • Bit_score: 362
  • Evalue 1.20e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCTGAAGAAACTGGCCATTGTTGGCGTTGCGGCGGTCTATCTGTCCGGTTGCACCACGACCGATCCCTATACCGGCGAACAGAAGGTATCGAACACCGCCGGCGGCGCGATGATCGGCGCCGGTCTCGGCGCGCTCGGCGGCCTTGCCGTCGGCGGTTCGCCGGTCGGGCGGCGCAATGCGGCGCTGATCGGCGCCGGCATCGGCGCCCTGGCCGGCGGCGCCATCGGCAATTACATGGACAGCCAGGAAGCGGAACTGCGCGCCCAGCTTCAGGGCACCGGCATTTCGGTGACCCGCGCCGGCGACCGCATCATTCTCAACATGCCTTCCAACATCACCTTCGCCACCGATCAGGATGCGATCAGCCCGGCCTTCTTCCCGACGCTGAATTCGGTCGCCGTCGTGCTGCGCAAGTTCAACCGCACGCTGATCGACGTCAACGGCCATACCGATTCGACCGGCAGCCTCGCGCATAACCAGGATCTGTCGCAGCGCCGTGCCTATTCCGTCGCCAACTATCTCGGCGACCAGGGCATCGACCAGCGCCGCGTCTCGGCCATGGGCTTCGGTCCCAGCCAGCCCATCGCCTCGAACGCCAGCGCCGCCGGCCGGGCCCAGAACCGGCGCGTGGAAATCACCATCGCCCCGATCACTCAGGGCTGA
PROTEIN sequence
Length: 222
MLKKLAIVGVAAVYLSGCTTTDPYTGEQKVSNTAGGAMIGAGLGALGGLAVGGSPVGRRNAALIGAGIGALAGGAIGNYMDSQEAELRAQLQGTGISVTRAGDRIILNMPSNITFATDQDAISPAFFPTLNSVAVVLRKFNRTLIDVNGHTDSTGSLAHNQDLSQRRAYSVANYLGDQGIDQRRVSAMGFGPSQPIASNASAAGRAQNRRVEITIAPITQG*