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SCNpilot_expt_1000_bf_scaffold_1744_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(20509..23655)

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump n=1 Tax=Rhizobium sp. AP16 RepID=J2CYC0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 999.99
  • Bit_score: 1539
  • Evalue 0.0
Putative efflux pump inner membrane protein {ECO:0000313|EMBL:GAJ90875.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 999.99
  • Bit_score: 1542
  • Evalue 0.0
acriflavin resistance (multidrug efflux transporter) protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 999.99
  • Bit_score: 1536
  • Evalue 0.0

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3147
ATGAGCGCCTCGACGGAAGGAAAATCCGGGGGATTCACCGCCCTGTTCATCCGCCGCCCGATCCTGGCGCTGGTGTTCAACACGCTGATGGTCGTCGCAGGCCTTGCCGCGTGGTTCGGCATCGAGGTGCGCGAGTTGCCGGATACCGACCAGCCGGTCATCACCGTGCGCACCACGCTGGACGGCGCCGCACCCCAGACCATCGACCAGCAGATCACCCGCATCATCGAGGGCGGCGTCGCCCGGGTCAGCGGGCTGAAATCGATTTCCTCCTCGTCCTCCTTCGGCTCCAGTCGCGTGACGCTGGAATTCACCGACAAGACCGATCTGGCGGTCGCCGCCAGCGATGTGCGCGACGCCATCGGCCGCATCCAGTCGCAACTGCCCGACAATGTCGATGCGCCGCAGATCGTCAAGGCCGATGCCGATTCGCAGCCGGTCATGCGGCTTGCGGTCACCTCCGATACGCTCAGCATGGACGATCTGACGCAACTCGTCGACAAGCAGATCTCCGACCGTCTCGCCGCCGTCGACGGCGTCGCCGACGTCCAGCTCTATGGTGACCAGGAAAAGGTTTTTCGTGTCGATATCGACCAGACGGCGCTGGCCAGCCGCGGGCTGACGGTCGCCGACCTCTCGACCATGTTGCAGACCGCCTCCATGGATGTGCCGGCCGGCTCGATCACGAGCACGACCCAGGATATCGTCGTGCGCGCCACCGCCAACCTCACCAAGCCGCAGGATTTCGAAAACCTCATCATCCAGAACCGGGTGCGGCTCGGCGATGTCGCCAGCGTGATGCTCGGCCCGCGTGACGGCACGACGGCGCTGCGCTCCAACGGCGTTACCGGCATCGGCCTCGGCATCATCCGCCAGGCGCAATCGAATACGCTCGATATTTCAACCGGCGTGCGCGCCGCCGTCGACGAACTCTCCGCCGCCGTGCCGCAGGGCGTCCATATCGCCATTACCAGCGATGACGCCGCCTTCATCGAGGGTGCGATCCATGAGGTGGAGCTGGCGTTGATCCTCTCGGCGATCATCGTCGTGGTCGTCATCTATCTCTTCCTGCGCGATTGGCGGGCGACGATCATTCCGGCGATCACCATGCCGGTGGCGCTGATCGGCACGATCGCCGCCCCCTATCTGATGGGGTTTTCGATCAACATCCTGACGCTGCTCGCCATCGTGCTGGCGACCGGGCTCGTGGTCGATGACGCCATCGTGGTGCTGGAAAACATCGTGCGGCGGCGCGGGCAGGGATTGCAGCCGCGCGCCGCAGCCGTTCTCGGCACGCGCGAGGTCTTCTTCGCGGTGATCGCGACGACGGCGACGCTGGCGGCTGTCTTCATTCCGCTGTCCTTCCTGCCGGGGCAGGTGGGCGGGCTGTTTCGCGAATTCGGCTTCGTGCTCGCCTTTTCCGTCGGCCTGTCGTCGATCGTGGCGCTGACGCTCTGTCCCATGCTCGCCTCGCGCATGCTGACCAAGGAGATGGTCGAGCATCATGGCGTTCTCGGCTGGATCGGGGATCGGTTCTCCGACATCTATCTGCGCCTGCTGCGCGCCTGCCTCAACGCGCCGGTGGTGGTGATCGCCGTCGGTGGAGTGTTCGCTGTCGCGGCGGTGCTGGCCTTCACCATGGTGACCAGCGAACTGACCCCGCGCGAGGACCGCGCCATGGTCATGCTGCGGGTGACGGCGCCGCAGGGCGTCAGCCTCGCCTATACGCAGGACCAGATGCAGCGCGTGGAGGAAGGGTTGGAGCCGTTGCGCGCTTCTGGCGAAATCCGCAACGTCTATTCGATCTCGGGCATGAACAACCAGTCGAATAACGGCTTCATGGTGCTGACGCTGGCCCCCTGGGATGCGCGCGAGCGCAGCCAGAACGACATCGTCTCCGACATCAATGCCGCCACGGCGCGGGTGCCGGGTCTGCGCGTCAACGTCATCCAGTCCAACAGCCTGCGCATTCGCGGCGCCGGCAGCGGCCTGCAATTCGCCATTCTCGGCAGCGACAACGAGAAGCTGACAGCCGCTGCGCAGAAGGTCGTGCAGGCGATGGACGAGAACGCCAGCTTCAGCCAGCCGCGCCTGACCAATGAGCCGACGCAGGCCCAGCTTTCGGTCGCCATCGACCGCGAGCGCGCCTCCGACATGGGCGTCAACATCGCCGGCCTGTCCACCGCCATCCAGTCGCTGCTCGACAGCCGCTCGGTGGTCGACGTCTATGTGGACGGCGAGGCCTATCCGGTGCTTCTGACCTCCAATACACGGCCGATCGACGATCCGACCGATCTCGAAAATCTGTTCGTCAAGACCGGCGACGGCAAGATCGTGCCGATGGCAACCATCGCCTCGCTCGATGAACGCGCCGTCGCGCCGCAATTGACCCGCGAGCAGCAATTGTCGTCGGTGGCGATCACCGCCGACCTGGCGCCGGGGCTGGCGCTTGGCGACGCACTGGCCGAAGCACAACGCATCGCCGCGCCGTTGTTGCCGCCGGGGGCGCGCATCCTGCCGCTGGCGGAGGCGGCGACGCTGCAGGACAATTCCTCCAGCATGCTGCTGACCTTCGGCTTCGCCATCGCCATCATCTTTCTGGTGCTGGCGGCGCAGTTCGAAAGCGTGCTGAGCTCGATCATCATCATGACGACGGTGCCGCTGGGGCTGGCCTGCGCCGTCTTTGCGCTGGTGCTGACCGGATCGAGCCTCAATATCTATAGCCAGATCGGCCTCGTGCTGCTGGTCGGGGTCATGGCGAAGAACGGCATCCTGATCGTCGAATTCGCCAACCAGCTTCGCGACCATGGCGAGGGCGTGCGTGTCGCCATCGAAAAGGCCTGCTCGATCCGCCTGCGGCCGGTGATGATGACGATGATCGCCACCATTCTCGGCGGTGTGCCGCTGGTCTTCGCCCATGGAGCGGGGGCCGAGGCGCGCAATGCGCTGGGCTGGGTGATCGTCGGCGGGCTCGGCATGGCGACGCTGGGGACCCTGTTCGTCACCCCGGTCGCCTATCTGCTGATTGCCCGTTTCGCCAAGCCGCATGCCGACGAGGAGCAGCGCCTGCATGCCGAAATGGCCCATGCCGGGCGCCTGACGACGGCGGCCAATGATGCGGAAATGCCAGCCGCGGCCGCCGAATAA
PROTEIN sequence
Length: 1049
MSASTEGKSGGFTALFIRRPILALVFNTLMVVAGLAAWFGIEVRELPDTDQPVITVRTTLDGAAPQTIDQQITRIIEGGVARVSGLKSISSSSSFGSSRVTLEFTDKTDLAVAASDVRDAIGRIQSQLPDNVDAPQIVKADADSQPVMRLAVTSDTLSMDDLTQLVDKQISDRLAAVDGVADVQLYGDQEKVFRVDIDQTALASRGLTVADLSTMLQTASMDVPAGSITSTTQDIVVRATANLTKPQDFENLIIQNRVRLGDVASVMLGPRDGTTALRSNGVTGIGLGIIRQAQSNTLDISTGVRAAVDELSAAVPQGVHIAITSDDAAFIEGAIHEVELALILSAIIVVVVIYLFLRDWRATIIPAITMPVALIGTIAAPYLMGFSINILTLLAIVLATGLVVDDAIVVLENIVRRRGQGLQPRAAAVLGTREVFFAVIATTATLAAVFIPLSFLPGQVGGLFREFGFVLAFSVGLSSIVALTLCPMLASRMLTKEMVEHHGVLGWIGDRFSDIYLRLLRACLNAPVVVIAVGGVFAVAAVLAFTMVTSELTPREDRAMVMLRVTAPQGVSLAYTQDQMQRVEEGLEPLRASGEIRNVYSISGMNNQSNNGFMVLTLAPWDARERSQNDIVSDINAATARVPGLRVNVIQSNSLRIRGAGSGLQFAILGSDNEKLTAAAQKVVQAMDENASFSQPRLTNEPTQAQLSVAIDRERASDMGVNIAGLSTAIQSLLDSRSVVDVYVDGEAYPVLLTSNTRPIDDPTDLENLFVKTGDGKIVPMATIASLDERAVAPQLTREQQLSSVAITADLAPGLALGDALAEAQRIAAPLLPPGARILPLAEAATLQDNSSSMLLTFGFAIAIIFLVLAAQFESVLSSIIIMTTVPLGLACAVFALVLTGSSLNIYSQIGLVLLVGVMAKNGILIVEFANQLRDHGEGVRVAIEKACSIRLRPVMMTMIATILGGVPLVFAHGAGAEARNALGWVIVGGLGMATLGTLFVTPVAYLLIARFAKPHADEEQRLHAEMAHAGRLTTAANDAEMPAAAAE*