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SCNpilot_expt_1000_bf_scaffold_6335_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 2011..3036

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6H2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 340.0
  • Bit_score: 537
  • Evalue 1.30e-149
Diguanylate cyclase {ECO:0000313|EMBL:EYR78792.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 340.0
  • Bit_score: 537
  • Evalue 1.80e-149
diguanylate cyclase similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 318.0
  • Bit_score: 176
  • Evalue 1.10e-41

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGGCGCGCATCGCGCATCTCATGGTCAGCCTCGGCATCGCCGCGCTGCCGCGCAACTACGAACTGCTGTTCGAGGCGCTGAACGGCAATGCGGGCGTCGCGCGCGAGATCGCGGCGCTGGGCAAGGCGCCAGAGCAGTCGGCGCTCGATGCCGTCGCCCTGCGCCATTCGCTGCCGAGCCACAATGTGCTTGCTGCCGGGCAGGCCGCCGGCGAGGCCGTGCGGGTTCTCACGGAAATCTCGAGGACGGCAGAGGAAAGCCATCGCCAGCGCGCCGCCGCGACGCAGGAACTGGAGGAAATCGCCGGCCGCCTGAGCCGGGATCCCGTGCTCGGCATTTCCGATTTCGGCAGCGACACGGCGCGCCTGCTCTCGCTGGTCCGCGACATTCTCGGCGCCGACCGGAAGGCCAGCGCCCGGCTCGACGATCTTCAGGCCCATCTCGACGGCCTGCGCTCGGGCCTTTCCGTCAGCCGCGAGGCGCTGACCCACGACCCGGTGACCGGGCTTGCCAACCACGCCGCGCTGCTCGGCCGGCTGAAGGGTCTCTTCAAGGAGACGTCGGGGGAGAATGCGTCGGCCCTGCTCCTCTTCCGCGTCGAGCAACTCAAGGACTTCGCCGAAACCCACCCGGCCGGTGCCGCGGAGAAGACGCTGAAGCGGCTCGCCGGCGTCTTCCGCCAGTCGGTGAAGAAGGAGGATTTCGTCGCCCGCTCCGGGCCGGACGTCTTCTGCCTGCTGCTTGCCGATGTCAGCCGCGAGATCGCCGTCACCATCGCCCGGCGCATCGCGGTCCGGGTCGCCGAAAAGCCCTTCCCCTTCATGGACCGCGAGCTTCCCGCCGGCTTCCTGACGCTGACGGCCGGCCTTTCGATGAGCGATTCGGCGCAGTCGCCGGCCATGCTCTACGACCAGGCGGAGCAGGCGCTCGGCTATGCGGCCGAGGCAGGCATCGCGCTACGCATCTATTCGGCCGAGGTCGCCGAACGGTCAAGCCGGGTCTATCGCGGGGGCAACGCGGCCTGA
PROTEIN sequence
Length: 342
MARIAHLMVSLGIAALPRNYELLFEALNGNAGVAREIAALGKAPEQSALDAVALRHSLPSHNVLAAGQAAGEAVRVLTEISRTAEESHRQRAAATQELEEIAGRLSRDPVLGISDFGSDTARLLSLVRDILGADRKASARLDDLQAHLDGLRSGLSVSREALTHDPVTGLANHAALLGRLKGLFKETSGENASALLLFRVEQLKDFAETHPAGAAEKTLKRLAGVFRQSVKKEDFVARSGPDVFCLLLADVSREIAVTIARRIAVRVAEKPFPFMDRELPAGFLTLTAGLSMSDSAQSPAMLYDQAEQALGYAAEAGIALRIYSAEVAERSSRVYRGGNAA*