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SCNpilot_expt_1000_bf_scaffold_6335_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3078..4961

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter, ATP-binding protein with duplicated ATPase domains (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 627.0
  • Bit_score: 1036
  • Evalue 0.0
ABC transporter permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMA4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 628.0
  • Bit_score: 1134
  • Evalue 0.0
ABC transporter permease {ECO:0000313|EMBL:EYR78793.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.0
  • Coverage: 628.0
  • Bit_score: 1134
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
ATGATCACGATTTCCGGCCTCACCGCCCGCGTAGCCGGGCGTCTCCTCATCGACAACGCGTCCGTTTCCCTGCCGAGCGGCGTGAAGGCGGGCCTCGTCGGGCGCAACGGCACCGGCAAGTCCACGCTGTTCCGCGTCATCACCGGCGACCTTGCCGCCGAAGCCGGAACCATAACGGTGCCGAAGAACGCGCGCATCGGCCAGGTGGCGCAGGAAGCGCCGGGCACGGACGATCCGCTGATCGAGATCGTGCTTGCCGCCGACAAGGAGCGCGCCGCCCTCATGAAGGAAGCGGAGACGGCGAGCGACCCGCACCGCATCGCCGAGATCCAGACGCGCCTCACAGACATCGGCGCCCATTCGGCGGAAGCGCGCGCGGCCAGCATCCTGGCCGGCCTCGGCTTCGACCACGAGGCGCAGCAGCGCCCGGCGAAGAGCTTTTCGGGCGGCTGGCGCATGCGCGTGGCGCTGGCGGCCGTGCTCTTCTCCGAACCCGACCTCCTGCTTCTCGACGAGCCGACCAACTATCTCGACCTCGAAGGCACGCTGTGGCTGGAAGATTACGTGAGGCGCTATCCGCACACGGTCATCATCATCAGCCACGACCGCGACCTGCTGAACACCGCCGTCAATTCGATCATCCATCTCGACCAGCAGAAGCTGACCTTCTACCGCGGCCCCTACGACCAGTTCGAGCGGCAGAAGGCCGAGGCGGACGAGTTGCAGATGAAGGCGAAGGCCAAGAACGACGCCGCGCGCAAGCACCTGCAGAGCTTCATCGACCGCTTCCGCGCCAAGGCGACGAAGGCCCGCCAGGCGCAGAGCCGCATCAAGGCGCTCGAGCGCATGGGCACGGTCGCCGCCGTGATCGAGACGCAGGTGCAGCCGATCACCTTCCCGGAGCCGGAAAAGCAGCCCGCCTCGCCGATCGTGGCGATCGAGGGCGGCGCCGTCGGCTATGTGCCGGGCAAGCCGATCCTCAAGCAGATCAACCTCAGGATCGACAACGACGACCGCATCGCCCTGCTCGGCTCGAACGGCAACGGCAAGTCGACCTTCGCCAAGTTCATCTCGGGCCGGCTGGAGGCGGAGGCCGGCGCGGTGAAGAAGGCGCCGAACCTCAAGATCGGCTTCTTCGCGCAGCACCAGCTCGACGACCTCGTCCCCGACCAGTCGCCGGTCGAGCATGTGCGCCGGCTGATGCCGGAGGCGCCGGAGGCCAGGGTGCGCGCCCGCGTGGCGCAGATGGGGCTTGCCACCGAGAAGATGTCGACGGCCGCCAAGGACCTTTCCGGCGGCGAGAAGGCCCGGCTCCTGATGGGCCTTGCCGCCTTCGACGCGCCGAACCTGCTCATCCTCGACGAGCCGACAAACCATCTCGACATCGACAGCCGTCGCGCGCTGATCGAGGCGCTGAACGACTATGACGGCGCCGTCATCCTGATCTCGCACGACCGACACCTGATCGAGGCGACCGTCGACCGGCTCTGGCTGGTCAGCGACGGCACCGTGAAGTCCTTCGACGGCGACATGGAGGACTACCGCAGCCTCATCGTGCAATCCGGCCGGAAGGACGACCGGGACAAGGTCGCGACCGGCGGCGAGGCCAGCAAGGCGGATCTGCGCAAGGCCAATGCCGACCGGCGCGCCCAGCTCGCTCCGCTCAAGAAAAAGATCAACGAAATCGAATCCCTGACGGCGAAGCTGCAGAAACAGATTCAGCTTCTCGACACGGAACTGGCGGACCCGATGCTCTACGAGAAGAGCCCGGCGAAGGCGGCCGAGAAGGCGAAATCGCGCTCGGTGGCGGTGGACCGGCTCAACGAGGCCGAGGAGCAATGGCTGGAGCTTTCGGCGCAATACGAAGAGGCGATGGCCGGCTGA
PROTEIN sequence
Length: 628
MITISGLTARVAGRLLIDNASVSLPSGVKAGLVGRNGTGKSTLFRVITGDLAAEAGTITVPKNARIGQVAQEAPGTDDPLIEIVLAADKERAALMKEAETASDPHRIAEIQTRLTDIGAHSAEARAASILAGLGFDHEAQQRPAKSFSGGWRMRVALAAVLFSEPDLLLLDEPTNYLDLEGTLWLEDYVRRYPHTVIIISHDRDLLNTAVNSIIHLDQQKLTFYRGPYDQFERQKAEADELQMKAKAKNDAARKHLQSFIDRFRAKATKARQAQSRIKALERMGTVAAVIETQVQPITFPEPEKQPASPIVAIEGGAVGYVPGKPILKQINLRIDNDDRIALLGSNGNGKSTFAKFISGRLEAEAGAVKKAPNLKIGFFAQHQLDDLVPDQSPVEHVRRLMPEAPEARVRARVAQMGLATEKMSTAAKDLSGGEKARLLMGLAAFDAPNLLILDEPTNHLDIDSRRALIEALNDYDGAVILISHDRHLIEATVDRLWLVSDGTVKSFDGDMEDYRSLIVQSGRKDDRDKVATGGEASKADLRKANADRRAQLAPLKKKINEIESLTAKLQKQIQLLDTELADPMLYEKSPAKAAEKAKSRSVAVDRLNEAEEQWLELSAQYEEAMAG*