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SCNpilot_expt_1000_bf_scaffold_1502_curated_39

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 42319..43680

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00036C21AD similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 452.0
  • Bit_score: 651
  • Evalue 4.80e-184
Type VI secretion ATPase, ClpV1 family {ECO:0000313|EMBL:EYR83984.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 447.0
  • Bit_score: 713
  • Evalue 1.40e-202
clpB3; ATP-dependent chaperone; type VI secretion associated protein; K11907 type VI secretion system protein VasG similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 444.0
  • Bit_score: 548
  • Evalue 2.30e-153

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGATCGATGTCGATCTTGGCGTGCTCGCCCGCGAGGAGCGCATCGGCGCCAACCATGCCGACCGCATCGCCGAACTCAAGGCGGACAAGGAAAAGACCGGCGAGGAACTGGCCGCCCTCGAAGCGCAATGGGAAAGGGAACGCGACCTGGTCGAGCGCATCCGCGCCCTGCAGGAAGCGCTCGGCGGCGAAGGCGAGCCCGAGGAGGGTGGCAAGTCGCCGGACGACATGCGCGCCGAACTGGCGGCGCTCAACGGCGAACTGACCGCACTTCAGGGTGAAACGCCGCTGATGCGCGTCACGGTCGATGCGCAGGCGATCGCCGAGGTCGTCGGCAACTGGACGGGCATTCCGGTGGGACGCATGGTCTCCAACGAGATCAAGACGGTGCTGTCGCTGAAGGAAAAGCTGAGCGAACGCGTCATCGGCCAGTCGCATGCGCTGGAGGCGATCGCCGAAACGATCCGCACCTCGCGCGCAAAACTGCTCGACCCGCGCAAGCCGATCGGCGTCTTCCTGATGGTCGGGACCTCGGGCGTCGGCAAGACCGAGACGGCGCTGGCGCTGGCCGACCTGCTGTATGGCGGCGAGCAGAACCTCACCGTCATCAACATGTCGGAATTCAAGGAAGAGCATAAGGTTTCCATGCTCGTCGGCTCGCCCCCCGGCTATGTCGGCTACGGCGAAGGCGGCGTGTTGACCGAAGCCGTGCGCCGCCGGCCCTATTCCGTCGTGCTGTTCGACGAAATGGAAAAGGCTCATCCCGGCGTCCAGGACGTGTTCTACCAGGTGTTCGACAAGGGCATGCTGCGCGACGGCGAAGGCCGCGACATCGACTTCAAGAACACGATCATCATCATGACCTCGAATGCGGGCACCGATCTCATTCACCGCCTCTATTCCGACCCGGCCCGCCGGCCGGACGCGGAGGAACTGGGCGATGCGCTGCGACCGGAGCTGCTGAAATCGTTCAAGCCGGCCTTCCTCGGCCGCTGCTCGGTCGTGCCTTACTTCCCGCTGGCGGACGATATCATCCGCAAGATCACCGAGCTTCAGCTGACCCGCATCCGCAAGCGCTTCCTGGAAAACTACAAGGCCAACCTCACCTGGGGCCCGGCGCTGGTCGAGCAGATCGCCAGCCGCTGCACGGAAGTCGAAAGCGGTGCGCGCAACATCGAGTACATCCTTTCGCGTGGGCTTTTGCCGCGCCTTTCCGCCCATGTCCTGTCGATCATGGCGGACGGGCGGCAGGTGGGCGATATCGAGGTTGTGCTCGATGAGTCGGGCGAATTCCAGTTCTCCGACCGGTCTTCGCCCGAAAGCGAGCAGGCGCTTGAGCCGGCCGCGACAGCGGCTCAATGA
PROTEIN sequence
Length: 454
MIDVDLGVLAREERIGANHADRIAELKADKEKTGEELAALEAQWERERDLVERIRALQEALGGEGEPEEGGKSPDDMRAELAALNGELTALQGETPLMRVTVDAQAIAEVVGNWTGIPVGRMVSNEIKTVLSLKEKLSERVIGQSHALEAIAETIRTSRAKLLDPRKPIGVFLMVGTSGVGKTETALALADLLYGGEQNLTVINMSEFKEEHKVSMLVGSPPGYVGYGEGGVLTEAVRRRPYSVVLFDEMEKAHPGVQDVFYQVFDKGMLRDGEGRDIDFKNTIIIMTSNAGTDLIHRLYSDPARRPDAEELGDALRPELLKSFKPAFLGRCSVVPYFPLADDIIRKITELQLTRIRKRFLENYKANLTWGPALVEQIASRCTEVESGARNIEYILSRGLLPRLSAHVLSIMADGRQVGDIEVVLDESGEFQFSDRSSPESEQALEPAATAAQ*