ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1502_curated_44

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 48376..48846

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYG0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 157.0
  • Bit_score: 287
  • Evalue 8.20e-75
Type VI secretion protein, VC_A0107 family {ECO:0000313|EMBL:EYR83979.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 157.0
  • Bit_score: 287
  • Evalue 1.10e-74
hypothetical protein; K11901 type VI secretion system protein ImpB similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 154.0
  • Bit_score: 239
  • Evalue 6.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGGCAGAAAGCGTACAACAGAAGCTGAAGCGGGTCCGCGCGCCGCGCGTCCACATCACCTATGACGTGGAAACGGAAGGCGCGCAGGTTCGCAAGGAACTGCCTTTCGTCGTCGGCGTCATCGGCGATTTCTCGGGCAAGCCCTATGAGCCGCTGAAGCCGCTCAAGGACCGCAAGTTCATCCAGATCGACCGCGACAATTTCGACGACGTCATGCAGCGCATGACGCCCGGCGCCGAATTCAAGGTCGATAACACGCTTGCCGGCGACGAATCCCAGCTTGCCGTGCAGCTCAAGTTCAAGTCGATGAACGATTTCGAGCCGGGCGCGGTCGTCCAGCAGGTCGAGCCGCTGCGCAAGCTGCTCGCCGTGCGCAACAAGCTGCGCGACCTGATGTCCAAGGTCGATCGCTCCGAAGAGCTGGAAAGCCTGCTCGAAGAAGTATTGCAGAACACCGAAAAGCTGACGGCT
PROTEIN sequence
Length: 157
MAESVQQKLKRVRAPRVHITYDVETEGAQVRKELPFVVGVIGDFSGKPYEPLKPLKDRKFIQIDRDNFDDVMQRMTPGAEFKVDNTLAGDESQLAVQLKFKSMNDFEPGAVVQQVEPLRKLLAVRNKLRDLMSKVDRSEELESLLEEVLQNTEKLTA