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SCNpilot_expt_1000_bf_scaffold_1298_curated_22

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(18832..19668)

Top 3 Functional Annotations

Value Algorithm Source
N-terminal TM domain of oligopeptide transport permease C family protein n=1 Tax=Nocardiopsis alba (strain ATCC BAA-2165 / BE74) RepID=J7L906_NOCAA similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 256.0
  • Bit_score: 184
  • Evalue 1.70e-43
N-terminal TM domain of oligopeptide transport permease C family protein similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 256.0
  • Bit_score: 184
  • Evalue 5.40e-44
N-terminal TM domain of oligopeptide transport permease C family protein {ECO:0000313|EMBL:AFR07925.1}; TaxID=1205910 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis alba (strain ATCC BAA-2165 / BE74).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 256.0
  • Bit_score: 184
  • Evalue 2.40e-43

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Taxonomy

Nocardiopsis alba → Nocardiopsis → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGATGAAAAAGCTCGCAATCCGCAACTGGTATGCCCTTTCGGCGCGGGCCTGCGTCGGCCTCGCCCTGATGCCGGTGATCCTGATCGGTATCTTCGGCAGCCGGTTCAGCGCCTACGGGCCGATCGATTTCGTCGACATGCCCCTGTCGCCGCCGACGCCGGAGGCCATGTTCGGAACGGATTTCGAAGGCCATGACGTGCTGAGCCGCTTCCTGCATGGCGGCTGGCAGTTGCTGGGCGTCGCCGGGCTTGGATCCCTGGGGGCCGTCTTTATCGGCAGCATCCTCGGGCTTGCCGGCGGCGTCTTCAGCGGACATGGCGCCGATCTGCTCTACCGCGTCCTCGATGGGATCATGGTGTTTCCGCCCCTGGTGCTGATTCTCGTGGTCATGACGGGCACGACCGACAGCGAGCTAGCGGTTCTCTTCGTCCTGTGGCTGGTGCTGGCGCCGCCGGTGGCGCGCATCATCCGGGTCGCGGCGGTCGCCATATCGCTGACGGAATATTTCCAGGCCGCGGTGGCGATCGGGACCGGCAAGTTCCGCCTGCTGGTGCAGGAGATCGCGCCGAATGTGGTGCCGCAGATTCTGGCGCTCATTCCCATCTATTTCACGGCATCGCTGTCGCTGGCCACCGCCGTTCATTTCCTCGGCTACGGCGTTTCGCCCTTCACGCCCGACTGGGGCGTCATGCTGGCGGAAAACCAGAGCGGCCTCGAATTGCAGCCCTGGGGCGTGGTGTTGCCGGTGGTGGCGATCGTCGCGATCTGCGTCGGCGTGAACCTCGTCACCGACGGGCTGACGCGCCGCTACCTCGATCAAAGTGTGCATATGTGA
PROTEIN sequence
Length: 279
MMKKLAIRNWYALSARACVGLALMPVILIGIFGSRFSAYGPIDFVDMPLSPPTPEAMFGTDFEGHDVLSRFLHGGWQLLGVAGLGSLGAVFIGSILGLAGGVFSGHGADLLYRVLDGIMVFPPLVLILVVMTGTTDSELAVLFVLWLVLAPPVARIIRVAAVAISLTEYFQAAVAIGTGKFRLLVQEIAPNVVPQILALIPIYFTASLSLATAVHFLGYGVSPFTPDWGVMLAENQSGLELQPWGVVLPVVAIVAICVGVNLVTDGLTRRYLDQSVHM*