ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1298_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(19665..20510)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MSQ9_SACVD similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 277.0
  • Bit_score: 222
  • Evalue 7.60e-55
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 277.0
  • Bit_score: 222
  • Evalue 2.40e-55
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ACU96657.1}; TaxID=471857 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 277.0
  • Bit_score: 222
  • Evalue 1.10e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saccharomonospora viridis → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
GTGATCCTCGGCCAGGAGGCGAGCCCCGAGCGCGTGGAGCAGCTTCGCGCGCTGCTCCATCTCGATCTTCCCGCCTGGGAGCGATACGCTCTCTGGCTGAAGCGGGCGGTTTTCGGCGATTTCGGAACCTCGCTTGTCAACGACATGACGGTCTGGGATTTCGTCGCGCACCGCTTCGCCGTCACCGGCATCCTGGTCCTGTTCGCCAGCATCCTGGCCTATCCGGTCGCGCTGACGCTCGGCGTGCTGTCTGCCGTGCGGCCGGGCTCGTTTCTGGATCGCGCGGTCGCCAGCCTCACGGTCATCTTCGGCGCGGTGCCGAACGTGGTGACGGGGATGGTGCTGACCCTCCTTTTCGCGACCTCCGTCTGGGCGGTGCTGCCGGCGATCTCGTCGATCTCCCCCGACAAGCCGCTCTGGGACCAACTGTCGCTGTTTGTCCTGCCGGCATTGACGCTGGCGCTCGGCGTCGTCTCCGGAGTGGTCTACAATGCACGGGCGGCCATGCGTGACGTGATGCAGATGAGCTACGTCACCAGCGCCCGCCTCAACGGCCTGCCGGAAAGCAATGTCATCTTCCTGCAGGCGCTGCCGAATGCGCTGCCGACCTGCATCCAGGCGATCGGCGTCGCGCTTGCCGATACGCTCGGCGGCGCGGTGGTGGTGGAGATCCTCTTCGGCCTGCCGGGCGTCGGCAGCGCGCTCAACCAGTCGGTCCACAATCGCGATATTCAGGTCGTGCAGGCTTTGACGGTCATCATCGCCGTGGCGGTGGTCTGTGTGTTCATCGTTTCGGACGTGCTCGCGCGTCTTGCGACCCCCAGAGACAGGACGCGCCGCGCATGA
PROTEIN sequence
Length: 282
VILGQEASPERVEQLRALLHLDLPAWERYALWLKRAVFGDFGTSLVNDMTVWDFVAHRFAVTGILVLFASILAYPVALTLGVLSAVRPGSFLDRAVASLTVIFGAVPNVVTGMVLTLLFATSVWAVLPAISSISPDKPLWDQLSLFVLPALTLALGVVSGVVYNARAAMRDVMQMSYVTSARLNGLPESNVIFLQALPNALPTCIQAIGVALADTLGGAVVVEILFGLPGVGSALNQSVHNRDIQVVQALTVIIAVAVVCVFIVSDVLARLATPRDRTRRA*