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SCNpilot_expt_1000_bf_scaffold_1298_curated_31

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(28978..29814)

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transporter inner membrane component; K11070 spermidine/putrescine transport system permease protein id=14628666 bin=bin8_Chloro species=Dehalobacter sp. FTH1 genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 262.0
  • Bit_score: 259
  • Evalue 3.20e-66
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 275.0
  • Bit_score: 222
  • Evalue 2.40e-55
Tax=CSP1_4_Chloroflexi similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 262.0
  • Bit_score: 259
  • Evalue 4.50e-66

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Taxonomy

CSP1_4_Chloroflexi → Gitt-GS-136 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 837
ATGTCGTCTAGCACGCCTGTCAAGCGGGAAGGGCTGGCGGTACGCGCCATGATCGGGTTTGCGCTCGTCTTCATGTTCGCGCCCGTCCTCACCATGATCGTCTTCTCCTTCAACGATCCCGGCGGACGCTTCAATTACGCGCTGGGCAGCTTCTCGCTGGAGGCCTGGCGCCATCCGTTCGCGGTGCCGCAGCTTGGCGTGGCGATCCGCAACAGCCTTGTGGTGGCTGCGGTTTCGGCGCTGCTGGCTGGGTTGCTCGGCACGCCAGTCGGCTTTGCGCTGGGGCGGCGGAAATTCCTCGGGCGCGGCGCGGTTTCGGGCCTCACCTTCATTCCCCTGGCGACCCCGGAAGTGGTGCTTGGCGCCGGCATGCTCATCCTCTTCGTGGCGACGGCGACGATCCCGCTCCTCAAGACCCTGACGGGCGGGCTGTTCTATCCGCTCGGTTTTCCGAGCGTCATTGCCGCTCATACGACGCTGGGCTTGAGCTTCGTCATCATCAACGTGCGCTCGCGCGTCATCGGCGCCGGAGTGACGCTGGAGCAGGCGGCGCGCGATCTCGGCGCCTCCGGCTTCACGGTGTTCCGCACGATCTGGCTACCGATCATCCTGCCGGGCATCCTCTCCGGCGCGCTGCTCACCTTCGCCATCTCGCTCGACGACTTTGTGCTGACCAACTTCACCGCCGGCGGAACGACCATGTTCCCGACCTGGCTTTACGGCCTGATGCGCCGCGAACTGCCGCCGCAGATCGCGGTTGTCGGCACGCTGATCTTCCTCGTGTCAATCGGCCTCGTCGCCCTCGCGGCAAAACTTTTGGGTCGCCGGACGGGCTGA
PROTEIN sequence
Length: 279
MSSSTPVKREGLAVRAMIGFALVFMFAPVLTMIVFSFNDPGGRFNYALGSFSLEAWRHPFAVPQLGVAIRNSLVVAAVSALLAGLLGTPVGFALGRRKFLGRGAVSGLTFIPLATPEVVLGAGMLILFVATATIPLLKTLTGGLFYPLGFPSVIAAHTTLGLSFVIINVRSRVIGAGVTLEQAARDLGASGFTVFRTIWLPIILPGILSGALLTFAISLDDFVLTNFTAGGTTMFPTWLYGLMRRELPPQIAVVGTLIFLVSIGLVALAAKLLGRRTG*