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SCNpilot_expt_1000_bf_scaffold_1298_curated_32

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(29804..30382)

Top 3 Functional Annotations

Value Algorithm Source
binding-protein-dependent transport systems inner membrane component id=14628667 bin=bin8_Chloro species=Streptomyces sp. Tu6071 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 199.0
  • Bit_score: 152
  • Evalue 5.00e-34
binding-protein-dependent transport system inner membrane protein; K11071 spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 215.0
  • Bit_score: 88
  • Evalue 2.20e-15
Tax=CSP1_4_Chloroflexi similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 199.0
  • Bit_score: 152
  • Evalue 7.10e-34

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Taxonomy

CSP1_4_Chloroflexi → Gitt-GS-136 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 579
GTGCTCGGCACACCCTTTGCGGTCGTGGCGGGTCTCACCTACCAGCTCGTGCCCTTCGTGCTGCTGCCGCTCCACGCTGCCTTCAACCGCATCGATCGTACGCTTTGCGCGGCGGCGGACGATCTCTATTCCGGCCGTTGCGGCGGGCGCGGGGCGGCCATCGGCGCGGTTGGCGGCCTTGCCATCGGGCTGCTGCTGGCTGCAGTTTTTTTCGACAGGGGCGGAATTTTTGCCACCTGGCCGATCGCCTTCGTGCTGGCGGCCGCAGGTCTCGGCGCGGCGGTAGGCGGCACGATGACGGAGCGCTTCGCGTTGATCGTCTTTCCGCTCAGTCGCAACGGTTTCATTGCCGCCGCCGTGCTGTCGTTCATCCCGGCGCTTGGCGATTACGTCAATGCCGCGTTGCTCGGCGATATCCGCACGCAGATGCTCGGCAACGTCATCCAGGCGAAATTCCTGGTGGAACTGGACTATGCGGGGGCGGCCGCCCTTTCGGCGACGCTGCTGGTCGCCGCCATGCTGCTGCTGACCCTTCTCCTGCGTCTCATTCGCGGTACGGAGCTTCTCGATGTCGTCTAG
PROTEIN sequence
Length: 193
VLGTPFAVVAGLTYQLVPFVLLPLHAAFNRIDRTLCAAADDLYSGRCGGRGAAIGAVGGLAIGLLLAAVFFDRGGIFATWPIAFVLAAAGLGAAVGGTMTERFALIVFPLSRNGFIAAAVLSFIPALGDYVNAALLGDIRTQMLGNVIQAKFLVELDYAGAAALSATLLVAAMLLLTLLLRLIRGTELLDVV*