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SCNpilot_expt_1000_bf_scaffold_1298_curated_33

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(30432..30836)

Top 3 Functional Annotations

Value Algorithm Source
Polyamine ABC transporter permease id=4591834 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 91.0
  • Bit_score: 74
  • Evalue 1.20e-10
binding-protein-dependent transport system inner membrane protein; K11071 spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 100.0
  • Bit_score: 62
  • Evalue 8.80e-08
Tax=RBG_16_RIF_CHLX_72_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 101.0
  • Bit_score: 78
  • Evalue 9.10e-12

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Taxonomy

RBG_16_RIF_CHLX_72_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 405
GTGGCTAAGGCGATCCCGCTCACGAAACCAGCCCGCCCGCGCTTCCTCAAGGCGCGGGCCGGCTGGCCGGAAATGCTGCCGACGCTGGCCTGGCTCGTCGCCCTCATCGTCGTGCCGCTTGTCTATATCCTGCGCATGTCGTTCAGCGCCGATCCCTTCGCGCTGACGGCAACCGGCTGGTCGCTTGCCAATTACGCGGATTCGATCCCGTTCTATTGGGACAACCTGCTGAATTCGGTGCTGATCGGCCTGTCGGCGACCATCCTCGCCTTCGCCATCGCCATGCCGGTCGCCTACGGCATTTCCTTCTATGGCGGGCGATGGAAGGCCGTGCTGCTCTNNNNNNNNNNNNNTGACGAGTTATCTGATCCGCATCGTTGCCTGGCAGACCCTGCTCGGCGCTAA
PROTEIN sequence
Length: 135
VAKAIPLTKPARPRFLKARAGWPEMLPTLAWLVALIVVPLVYILRMSFSADPFALTATGWSLANYADSIPFYWDNLLNSVLIGLSATILAFAIAMPVAYGISFYGGRWKAVLLXXXXXDELSDPHRCLADPARR*