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SCNpilot_expt_1000_bf_scaffold_1298_curated_34

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(30829..31950)

Top 3 Functional Annotations

Value Algorithm Source
extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein id=14628668 bin=bin8_Chloro species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 29.8
  • Coverage: 352.0
  • Bit_score: 162
  • Evalue 7.20e-37
family 1 extracellular solute-binding protein; K11069 spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 323.0
  • Bit_score: 148
  • Evalue 4.40e-33
Tax=CSP1_4_Chloroflexi similarity UNIPROT
DB: UniProtKB
  • Identity: 29.8
  • Coverage: 352.0
  • Bit_score: 162
  • Evalue 1.00e-36

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Taxonomy

CSP1_4_Chloroflexi → Gitt-GS-136 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1122
ATGAACAGGTGCAGTTTTACGGCCAATCGCCGGCAGACCCTCAAGCTCCTCCTCGCCGGAGCGGGCGTCATGGGCGGCCGCCTCGTCCTTCCGTCCTCCGCGGCCCATGCCGCGGAGAACACCATCGTCTGGGCCGCCAATTCCGGCGAATGCGACCCGGCCGACATCGCCCGTTTCAAGGAGCAGACGGGCATCACCGTGGACTACCGTGAGGTCATTTCCGACGCCGACCAGTTTTTTGCCAGCGTCCGCCCGCAATTCACCGCCGGCCTGCCGATCGGCTACGACGTGATCTGCATCAGCAGCCAATATACATCCTTCTACGCGGAAAATGGCTGGCTCGAACCGCTCGATCCCGCCGCCCTGCCGAATGTGCAAAAGAACCTGCTGCCGTCGCTGAAATCGGTCAAGCATGCCGATATCGCCATACCCTTCGACTTCGCGCCGGTTGGCCTTGCCTTCAATCGCGCGTATTTCAAGGGCGGGCTGCAATCCTGGGGACAATTGCTCGACCCGGCGGTAAAGGGCAAGGTCGGGCTCTATGCCACGCCCGTCGTCAACGTCGCCGCCTGGGGGCTTTACCTCAAATCGCAAGGCAAGATCGACCATGTGCCGGCCGAGATGACGCTGGAGGAGGCGATGGAGGTGCTGGCCTTCCTGAAACCGCACATCGAAAGCGGGCAGCTTCTGCCGGCGCAAGGCGAGAATGCCGGCCAGAAACTCTCGAACGGCGATCTGATCGCCTCCATGGCTCCGCCCGTCAACATCTCCCAGCTTGATCCGGTAAAGGTCGGCTTCGCCGTGCCGAAGGAGGGCGCACCCGCCTATGTCGACCGGCTCGGCATTCCCAAGGGTGCCGCCGATCCGAAGGCCGCGCTCGCCTTCATCGACTGGTGGTTCCGGCCGGAAAACGCCGCGAGCTTCTGCCGCTACACGCTGCAATATCCCTATGCCGTCGGCGTCAAGGAGGAGCTTGCAAAGATTGATCCGGCGCTTGCCGCCAATCCGCTGATCTTCCCGCCCGCCGATGTGCTCGACCGGCTGTTTCCCTATCCGGCGCCCTGGGACCAGCGCGAACGCGCCCAGATCGCCCGAACCTGGATGCAGATGATCAGTGGCTAA
PROTEIN sequence
Length: 374
MNRCSFTANRRQTLKLLLAGAGVMGGRLVLPSSAAHAAENTIVWAANSGECDPADIARFKEQTGITVDYREVISDADQFFASVRPQFTAGLPIGYDVICISSQYTSFYAENGWLEPLDPAALPNVQKNLLPSLKSVKHADIAIPFDFAPVGLAFNRAYFKGGLQSWGQLLDPAVKGKVGLYATPVVNVAAWGLYLKSQGKIDHVPAEMTLEEAMEVLAFLKPHIESGQLLPAQGENAGQKLSNGDLIASMAPPVNISQLDPVKVGFAVPKEGAPAYVDRLGIPKGAADPKAALAFIDWWFRPENAASFCRYTLQYPYAVGVKEELAKIDPALAANPLIFPPADVLDRLFPYPAPWDQRERAQIARTWMQMISG*