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SCNpilot_expt_1000_bf_scaffold_2955_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3539..5767)

Top 3 Functional Annotations

Value Algorithm Source
(P)ppGpp synthetase, RelA/SpoT family n=1 Tax=Rhizobium sp. CF142 RepID=J2AWH9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 744.0
  • Bit_score: 1304
  • Evalue 0.0
(P)ppGpp synthetase, RelA/SpoT family {ECO:0000313|EMBL:EJJ27830.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 744.0
  • Bit_score: 1304
  • Evalue 0.0
GTP pyrophosphokinase similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 747.0
  • Bit_score: 1295
  • Evalue 0.0

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2229
ATGATGCGGCAATACGAGCTCGTCGAGCGGGTTCAAAAATACAAGCCGGATGCCAATGAAGCGCTGCTCAACAAGGCCTATGTCTATGCCATGCAGAAGCATGGCCAGCAGAAGCGGGCAAGCGGCGATCCTTATATCTCGCATCCGCTCGAAGTCGCCGCCATCCTCACCGAGTTGCATCTCGACGAATCCACTATCGCGGTGGCGCTGCTGCACGACACGATTGAGGACACGACGGCGACCCGCGCCGAGATCGACGAACTGTTCGGCGAGGATATCGGCGCCCTCGTCGAGGGCCTGACCAAGATCAAGAAGCTCGACCTCGTCACCAAGAAGGCCAAGCAGGCGGAAAACCTGCGCAAGCTGCTGCTGGCGATTTCCGACGACGTGCGCGTGCTGCTGGTCAAGCTTGCAGACCGCCTGCACAACATGCGCACGCTGGAGCACATGAACCCGGAAAAGCGCGCCCGCATTTCCGAGGAGACCATGGATATCTATGCGCCGCTCGCCGGCCGCATGGGTATGCAGGACATGCGCGAGGAACTGGAACAGCTTTCCTTCCAGTATATCAACCCGGAAGCCTTCGACACGATCACCAAGCGGCTACAAGAACTGTCAGACCGCAACGAGGGCCTGATCAAGAAGATCGAGGACGAGTTGCGCGACCTGCTGATCGCCAACGGCCTCACCAATGCCTTCGTCAAAGGCCGCCAGAAGAAGGCCTATTCGGTCTTCCGCAAGATGCAGTCGAAATCGCTTTCCTTCGAGCAGCTTTCGGATGTCTACGGCTTCCGCATCATCGTCGACGATATCCCCGCCTGTTACCGGGCGCTCGGTATCGTCCACACCCGCTGGCGCGTGGTGCCGGGTCGTTTCAAGGATTATATCTCGACGCCGAAGCAGAACGACTACCGCTCGATCCACACCACCATCGTCGGCCCGTCGAGCCAGCGCATCGAGCTGCAGATCCGCACGCGGCGCATGCATGAGATCGCCGAATTCGGCATCGCCGCCCATACGCTCTACAAGGATGGGGCGACGGGAGGCGACGCGGAACTGCTGTCGCGCGAATCCAACGCCTATTCCTGGCTGCGCCACACCATCGAATCGCTGGCCGAGGGCGATAGCCCCGAAGAATTCCTCGAACACACCAAGCTGGAGCTGTTCCAGGACCAGGTCTTCTGTTTCACGCCCAAGGGCAAGCTGATTGCGCTGCCGCGCGGGGCGACGCCGATCGATTTCGCCTATGCGGTCCATACCAATATCGGCGACACCACGGTCGGCGCCAAAATCAACGGCCGCATCATGCCGCTGGTAACCCGCCTCAACAATGGCGACGAGGTCGAGATCATCCGCTCCGGCGTGCAGGTGCCGCCGGCCGCCTGGGAAGAGATCGTCGTCACCGGCAAGGCGCGCGCCGCCATCCGCCGCGCCACCCGCATGGCGATCCGCAAGCAATATGCCGGCCTCGGCCAGCGCATCCTGGAGCGCACCTTCGAGCGCGCCGGAAAGATCTTCACCAAGGATGTGATGCGGCCGGCGCTGCACCGCCTTGGCCGCAAGGAGGTCGAGGACGCCATCGCCTCGGTCGGCCGCGGCGAGATGTCGTCGCTCGACGTGCTGCGTGCCGTCTATCCCGACCATCCCGATGAGCGCGCTACCGTCAAGCCGAGCAATGGCGAGGGCTGGTTCAACGTGCGCAGCGCGTCCGGCATGATCTTCCGCATTCCCGGCGCGTCCAAGACCGATGCAGGGCGGCTGGCGGGGGAGGATGCCGACGACGTGCTGCCGATCCGCGGCCTTGCCGGCAATGCCGAGGTGCATTTCGCCCGCGCCGGCGCCGTGCCGGGCGATCGCATCGTTGGCATCGTCGAGGAAGGCAAGGGCATCACCATCTATCCGATCCAGTCGCCGGCGCTGCAACGCTTCGACGACACGCCGGAAAGCTGGATCGACGTGCGCTGGGATCTGGACGAGGCCAACAAGTCGCGCTTCATGGCCCGGCTGCTGATCAATGCGCTCAACGAGCCCGGCACGCTGGCCAAGGTCGCCCAGACGGTCGCAGATCTCGACATCAACATCCGCACGCTTAGCATGATCGGCATCGCCACCGATTTCTCGGAAATGGCCCTCGATGTCGAGGTCTGGGATCTGCGCCAGCTCAACAAGCTGCTCTCCAGCCTCAAGGAACTGGATTGCATCGCCACCGTTCGCCGCGTCTTCGATTGA
PROTEIN sequence
Length: 743
MMRQYELVERVQKYKPDANEALLNKAYVYAMQKHGQQKRASGDPYISHPLEVAAILTELHLDESTIAVALLHDTIEDTTATRAEIDELFGEDIGALVEGLTKIKKLDLVTKKAKQAENLRKLLLAISDDVRVLLVKLADRLHNMRTLEHMNPEKRARISEETMDIYAPLAGRMGMQDMREELEQLSFQYINPEAFDTITKRLQELSDRNEGLIKKIEDELRDLLIANGLTNAFVKGRQKKAYSVFRKMQSKSLSFEQLSDVYGFRIIVDDIPACYRALGIVHTRWRVVPGRFKDYISTPKQNDYRSIHTTIVGPSSQRIELQIRTRRMHEIAEFGIAAHTLYKDGATGGDAELLSRESNAYSWLRHTIESLAEGDSPEEFLEHTKLELFQDQVFCFTPKGKLIALPRGATPIDFAYAVHTNIGDTTVGAKINGRIMPLVTRLNNGDEVEIIRSGVQVPPAAWEEIVVTGKARAAIRRATRMAIRKQYAGLGQRILERTFERAGKIFTKDVMRPALHRLGRKEVEDAIASVGRGEMSSLDVLRAVYPDHPDERATVKPSNGEGWFNVRSASGMIFRIPGASKTDAGRLAGEDADDVLPIRGLAGNAEVHFARAGAVPGDRIVGIVEEGKGITIYPIQSPALQRFDDTPESWIDVRWDLDEANKSRFMARLLINALNEPGTLAKVAQTVADLDINIRTLSMIGIATDFSEMALDVEVWDLRQLNKLLSSLKELDCIATVRRVFD*