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SCNpilot_expt_1000_bf_scaffold_1583_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 18696..20057

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbL n=1 Tax=Nitratireductor indicus C115 RepID=K2PMD2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 453.0
  • Bit_score: 869
  • Evalue 1.10e-249
Conjugal transfer protein TrbL {ECO:0000313|EMBL:EKF42242.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 453.0
  • Bit_score: 869
  • Evalue 1.60e-249
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 453.0
  • Bit_score: 859
  • Evalue 4.70e-247

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Taxonomy

Nitratireductor indicus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGGGCGGCACCGGCGTCATCGACAACTTTCTGGGTGTTTTCACCAGTTACATCGACAGCGGCTTCGGCCTGCTTGGCGGCGAGGTCGCCTTCATCGCCACCACCCTGATCGTCATAGACGTGACGCTTGCGGCACTGTTCTGGTCCTGGGGTGCGGATGACGACGTCATCGCCCGGCTGGTCAAGAAGACGCTCTTCGTCGGGGTCTTCGCATACCTGATCGGCAACTGGAACAATCTCGCCCAGATCATCTTCGACAGCTTCGCCGGTCTTGGCCTGAAAGGTTCGGGCACCAGCTTTTCCGCCGCCGATCTGCTGCGGCCCGGCAAGGTGGCGCAGACCGGCCTCGATGCCGGTCGCCCGCTGCTCGAATCCATCTCGGACATGATGGGTTATTGGTCGTTCTTCGAGAACTTCATCCAGATCGCCTGCCTGATGTTCGCCTGGGCGCTGGTACTGCTGGCCTTCTTCATTCTCGCCGTGCAGCTCTTCGTCACGCTGATCGAGTTCAAGCTGACCACGCTGGCGGGCTTTGTCCTCATTCCCTTCGGCCTCTTCGGCAAGACCGCCTTCATGGCCGAGCGCGTTCTTGGCAATGTCGTCTCCTCCGGCATCAAGGTGCTGGTGCTCGCCGTCATCATCGGCATCGGCTCGACATTGTTCTCGCAGTTTACGGTCGGTTTCGGCGGCGTGACGCCGACCATCGACGACGCCATGGCGATCGTGCTGGCCGCACTTTCCCTTCTCGGCCTCGGCATCTTCGGTCCCGGCATCGCTTCCGGTCTGGTTTCTGGCGGCCCGCAGCTTGGTGCAGGTGCAGCAGTCGGAACCGGTCTCGCCGCTGGCGGCATGATGCTTGCCGGCGGCGCTGCCGCAGGCATGGCCGCGAAGGGAGGGGCAGCGGCGCTATCGGGTGGAGCTGCGGCTGTCCGTGGCGGTGCTGCTGCCGCAGGTGCGGCGAGCGCCGCCTATAGTGTCGGATCGCTCGGCCAGTCAGGGGCTGCCGGTGTTGCCTCCGGCCTCGGCGGTGTTGCCCGCGCGGCAGGCTCCGCCGCCGCATCGCCCCTGAAACGAGCGACCTCGAAAGCAGCGGAAAGCGTCAAATCCAGCTTCTCCGATGGCGCGCGCGCCGGGCTCGGCGTCACCGGTGGATCGGCCTCGCTTGGAACCATTGGTGGTGCGAGCGTGGCCGGTGCCGCACCCGCCTCCGCACCGGCGGGCGGACCGCCTGCATGGGCGCAGCAGATGCACCGCCGCCAGGCGCTCAATCACGGCACGACCATGGCCGCCCATGCCGTCCGCTCCGGTGACAGCCACGGCGGCGGCTCTTCCGTCAACATTTCCGAAAGTGACCGCTCATGA
PROTEIN sequence
Length: 454
MGGTGVIDNFLGVFTSYIDSGFGLLGGEVAFIATTLIVIDVTLAALFWSWGADDDVIARLVKKTLFVGVFAYLIGNWNNLAQIIFDSFAGLGLKGSGTSFSAADLLRPGKVAQTGLDAGRPLLESISDMMGYWSFFENFIQIACLMFAWALVLLAFFILAVQLFVTLIEFKLTTLAGFVLIPFGLFGKTAFMAERVLGNVVSSGIKVLVLAVIIGIGSTLFSQFTVGFGGVTPTIDDAMAIVLAALSLLGLGIFGPGIASGLVSGGPQLGAGAAVGTGLAAGGMMLAGGAAAGMAAKGGAAALSGGAAAVRGGAAAAGAASAAYSVGSLGQSGAAGVASGLGGVARAAGSAAASPLKRATSKAAESVKSSFSDGARAGLGVTGGSASLGTIGGASVAGAAPASAPAGGPPAWAQQMHRRQALNHGTTMAAHAVRSGDSHGGGSSVNISESDRS*