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SCNpilot_expt_1000_bf_scaffold_1583_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 20054..20743

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDW7_ZYMMN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 229.0
  • Bit_score: 459
  • Evalue 2.30e-126
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 229.0
  • Bit_score: 459
  • Evalue 7.20e-127
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EPR17229.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 229.0
  • Bit_score: 456
  • Evalue 1.60e-125

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Taxonomy

Sphingobium chinhatense → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAACATCTTCAGACGTCCAGCGACCCATTACGGCAAATCGCCCGAACCCGAGACGCCTTACCAGAAAGCCGCACAAGTCTGGGACGAGCGCATCGGCTCGGCTCGCGTGCAGGCCAAGAACTGGCGCTATATGGCCTTCGGCTCGCTGATCCTCTCGGCGGGCTTCGCTGCCGCGCTGGTTCTGCAATCGGCGCGAGGGACCGTCGTGCCCTGGGTGGTGCAGGTCGATAATCTCGGCCAAGCCCAGACCGTCGCCGCAGCCACCGCCGATTACCGTCCGACCGATCCGCAGATCGCCTTCCATCTTGGCCGTTTCATCGAGCAGACGCGCTCGATCCCGGCGGACGCCATCATCGTGCGCCAGAACTGGCTGCGCGCCTATGAGTTCACCACAGATAGGGGAGCGGCCGCGCTCAACGACTATGCCCGCGCCAACGATCCGTTCACCCGTGTCGGCCGCCAGCAGATCGCAGTCGAGGTTTCCAGCGTCATACGCGCCTCGAACGACAGCTTCCGCGTCGCCTGGACCGAGCGTCACTATGAGAACGGGCAGCTTTCCAGGACCGAGCGCTGGACCGCGATCCTGACCATCGTGATCCAGACGCCGCGCGATGCCGAGCGTCTGCGCACCAATCCGCTCGGCATCTACGTCAATGCAATTTCATGGTCGCGGGAGATGAGCCAATGA
PROTEIN sequence
Length: 230
MNIFRRPATHYGKSPEPETPYQKAAQVWDERIGSARVQAKNWRYMAFGSLILSAGFAAALVLQSARGTVVPWVVQVDNLGQAQTVAAATADYRPTDPQIAFHLGRFIEQTRSIPADAIIVRQNWLRAYEFTTDRGAAALNDYARANDPFTRVGRQQIAVEVSSVIRASNDSFRVAWTERHYENGQLSRTERWTAILTIVIQTPRDAERLRTNPLGIYVNAISWSREMSQ*