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SCNpilot_expt_1000_bf_scaffold_1015_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 117..659

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J849_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 185.0
  • Bit_score: 201
  • Evalue 8.90e-49
transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 185.0
  • Bit_score: 201
  • Evalue 2.80e-49
TetR family transcriptional regulator {ECO:0000313|EMBL:KEA06034.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 185.0
  • Bit_score: 201
  • Evalue 9.50e-49

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCAGAATCGCATCGCCGCAAGAAACAGCCTGAACGTGTCCGCCGGCAACTCGTCGATGTCGCCGCGCGCATCGCTTCCGAGCAGGGGGTGGGCGCCGTCACCCTCGACGCTGTGGCCCAGGCCGCCGGCGTCAGCAAGGGCGGGCTGCTGCATCATTTTCCCGGCAAGCTGCCGCTGCTCGACGGATTGTTCGAGCATCTGGTCGAGGAGTTCGACCGGGCGCTGGCCGAGGAAATGCGCCAAGATCCGGTGGCGCAGGGGCGATTTTCCCGCGCCTATCTGCGCGTCGTCGCCGACCTGCGCGACAACCCGGTCGAAAGCCGGCAATGGGCGGGCCTGACCATGGCGATGCTGAACGAGCCGCATCTGCGCGAGCGCTGGCGGGCTTGGGGCGAGCAGCGCAACACCGATTACGTCGGCACGGATTCCTNNNNNNNNNNNNNNNNNNNNNNNCTTGCGGACGTCACCGATTGCCAGACGATCGACCCGGAGGCGCGCAAGGCGCTGGTCGAGCGACTGGTGGCGATGACGCTGGCCTGA
PROTEIN sequence
Length: 181
MSESHRRKKQPERVRRQLVDVAARIASEQGVGAVTLDAVAQAAGVSKGGLLHHFPGKLPLLDGLFEHLVEEFDRALAEEMRQDPVAQGRFSRAYLRVVADLRDNPVESRQWAGLTMAMLNEPHLRERWRAWGEQRNTDYVGTDSXXXXXXXXLADVTDCQTIDPEARKALVERLVAMTLA*