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SCNpilot_expt_1000_bf_scaffold_1015_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 678..1019

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000362B214 similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 113.0
  • Bit_score: 167
  • Evalue 8.90e-39
Small multidrug resistance protein {ECO:0000313|EMBL:EPE97223.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 113.0
  • Bit_score: 163
  • Evalue 1.40e-37
methyl viologen/ethidium resistance transmembrane protein; K03297 small multidrug resistance protein, SMR family similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 113.0
  • Bit_score: 161
  • Evalue 1.20e-37

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAGCCCGACGATGTTGTATGCCCTTTTGTTCACCGCCATCGGCCTCGAAGTCGCCGGCACGTCGGCGCTGCAGATGTCGCAGCAGTTCACCCGGCCGTGGCCGACGCTGGCAATGATCCTTTGCTATGTCGCCTCCTTCTATTGCCTGTCGCATGTGCTGCGCACCATTCCGGTCGGGCTGACCTATGCGATCTGGAGCGGGCTCGGCATCGTGCTGATCTCGGCGGTCGGTTATTTCTTCTTCCGGCAGACGCTGGATCTGGCGGCGATTATCGGCCTCGGGCTGATCATCGCCGGCGTGCTGGTCGTCAATATGTTTTCCAACAGCATTTCGCATTAA
PROTEIN sequence
Length: 114
MSPTMLYALLFTAIGLEVAGTSALQMSQQFTRPWPTLAMILCYVASFYCLSHVLRTIPVGLTYAIWSGLGIVLISAVGYFFFRQTLDLAAIIGLGLIIAGVLVVNMFSNSISH*