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SCNpilot_expt_1000_bf_scaffold_1396_curated_66

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 74947..75360

Top 3 Functional Annotations

Value Algorithm Source
Putrescine importer PuuP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CLM8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 137.0
  • Bit_score: 246
  • Evalue 1.80e-62
Putrescine importer PuuP {ECO:0000313|EMBL:EYR82218.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 137.0
  • Bit_score: 246
  • Evalue 2.60e-62
amino acid permease similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 137.0
  • Bit_score: 170
  • Evalue 5.20e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGGGCCGCGACAGCGTGCTGCCGGCCGGCATCTTCGGCAGGCTGCATGAGACATGGCGCACGCCGGTCATGAACCTCGTCGTCGTCGGCATCGTCGGGCTTCTGGCGCTGACGCTCGACGTCACCACCTCGACCTCGTTCATCAATTTCGGTGCGTTCCTCGCCTTCACCGCCGTCAACGTCTCGGTGATCGCGCTTTATCTGAAGGGGAATGCCGTCGTGCGGCCGCTCGGTCCTCTCGTCGGGCTGCTCGTGCCGGCGGCGGGCGCGCTGTGCGATCTCTTCCTGTTGTGGAACCTCGACGGCAATGCCAAGCTGCTCGGCCTCGCCTGGCTGGCGCTCGGCATCTGCTATCTCGCCTATCTCACCCGCTTCTTCCAGACGGCGCCGCCGGAAGTGGAATTCGTCGAGTGA
PROTEIN sequence
Length: 138
MGRDSVLPAGIFGRLHETWRTPVMNLVVVGIVGLLALTLDVTTSTSFINFGAFLAFTAVNVSVIALYLKGNAVVRPLGPLVGLLVPAAGALCDLFLLWNLDGNAKLLGLAWLALGICYLAYLTRFFQTAPPEVEFVE*