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SCNpilot_expt_1000_bf_scaffold_1396_curated_83

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(90712..91209)

Top 3 Functional Annotations

Value Algorithm Source
Free methionine-R-sulfoxide reductase MsrC {ECO:0000313|EMBL:EYR84423.1}; EC=1.8.4.14 {ECO:0000313|EMBL:EYR84423.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 162.0
  • Bit_score: 273
  • Evalue 1.80e-70
Free methionine-R-sulfoxide reductase MsrC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWM8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 162.0
  • Bit_score: 273
  • Evalue 1.30e-70
putative GAF sensor protein; K07170 GAF domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 161.0
  • Bit_score: 242
  • Evalue 1.00e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGTTTGTAGCCCAGAAAATCGAAGCCGGTGACAAGGCCGGCTTTTATCGCGAACTACTTGCCCAGGCCGGCGGCCTGTTGCAGGGCGAGCGCGACGCCATCGCCAATGCCGCCAATCTCTCGGCGCTGATCCATGACGCCGTGCCGGATCTCAACTGGACCGGCTTCTATTTCCTGAAGACGCCAAGTGAACTGGTGCTCGGCCCCTTCCAGGGCAAGGTCGCCTGCGTGCGCATTCCCGTCGGCAAGGGCGTGTGCGGCGGCGCGGTGGCTAAGGGCCGCAGCCTGCTGGTGCCGGATGTTCATGCCTTTCCCGGCCATATCGCCTGCGATTCCGCCTCGCGCTCGGAACTCGTGGTGCCGTTGATCCGCGATGGCGCCGTCTTCGGCGTGCTCGATCTGGACAGCCCGCTGCCCGGCCGCTTCACCAATGAAGATCAGCAGGGCTTCGAGGCGCTTGCCGCGCTCTATGTCGCGGCAAGCGACCCCTGGGGCTGA
PROTEIN sequence
Length: 166
MFVAQKIEAGDKAGFYRELLAQAGGLLQGERDAIANAANLSALIHDAVPDLNWTGFYFLKTPSELVLGPFQGKVACVRIPVGKGVCGGAVAKGRSLLVPDVHAFPGHIACDSASRSELVVPLIRDGAVFGVLDLDSPLPGRFTNEDQQGFEALAALYVAASDPWG*