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SCNpilot_expt_1000_bf_scaffold_4046_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4496..5494)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirB11 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5I5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 332.0
  • Bit_score: 620
  • Evalue 1.10e-174
Type IV secretion system protein VirB11 {ECO:0000313|EMBL:EYR82760.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 332.0
  • Bit_score: 620
  • Evalue 1.60e-174
type II secretion system protein E; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 324.0
  • Bit_score: 344
  • Evalue 4.90e-92

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGAAGCAGTTTCCGTTCCTCGACAAAGCACTGGAGCGGCTGAAGCCGTTTCTCTCGGATGAGCGCGTCTCCGAAATCTCGGTGAACCGGCCAGGCGAACTGTTCGTCGAACGGCTCGGCGTCGGCGGCATGGAGCAGGTTGTCGATCCGCAGTTTTCCGCCGAATGGATACGGACGCTGAGCGAGCGCGTCGCCGGTTCCACCAACCAGGTCGTCAACGACGAGCATCCCATCCTGTCGGCATCGCTCCCGACCGGCGAACGTTTCCAATGCGTCCTGCCGCCGGCCGCACCCGACGGTGGCGCGATCTCGATCCGCAAGCAGGTGATCCACGATATCGGCCTAGACGTCTATAAGGACCGCGGTGCCTTCGAGGACACCAAGGTCGGGCGCCAGCTGACGCTTTCGGCGGCCGAGGAAGAGCTTGCCGCCAGGATGCAGGGCGATGTCGACGCCATGCTGTTTCTTCGGACGGCCGTGCGCTCACGGGTCTCGATCGCCGTCTCCGGTGGCACCTCAACAGGCAAAACCACCTTTCTCAACGCGCTCCTGAAAGAAGTGCCGGATGAGGAGCGTATCGTCACTATCGAGGACACCCGCGAGCTGAAGCCGATCACGCCGAACACGGTTGCCCTGATTGCCTCGAAGGGCGACCAGGGCCGCGCCAAGGTGACGCCGCAGGAATTGTTGGAAGCCTCTCTGCGCATGCGGCCGGATCGGTTGATGCTTGGCGAGTTGCGCGGCGCCGAAGCGTTTTCCTTCCTGCAGGCGATCAACACCGGCCACCCGGGATCACTGACGACGGTCCACGCCAACTCGGCACGTTCGGCCTATGACCGCCTGGCGCTGATGGTTATGCAGAGCGGCGTTGCGCTCGAGAAGCAGGAGATCATCGACTACCTGAAGGAGGTTATCCCTGTCGTCGTCCAGCTTGCGCGCCTTCCGGACGGCCGCCGCGTCGTCTCGGAAATCGTCTTCACCAAGGGAGACACGCTATGA
PROTEIN sequence
Length: 333
MKQFPFLDKALERLKPFLSDERVSEISVNRPGELFVERLGVGGMEQVVDPQFSAEWIRTLSERVAGSTNQVVNDEHPILSASLPTGERFQCVLPPAAPDGGAISIRKQVIHDIGLDVYKDRGAFEDTKVGRQLTLSAAEEELAARMQGDVDAMLFLRTAVRSRVSIAVSGGTSTGKTTFLNALLKEVPDEERIVTIEDTRELKPITPNTVALIASKGDQGRAKVTPQELLEASLRMRPDRLMLGELRGAEAFSFLQAINTGHPGSLTTVHANSARSAYDRLALMVMQSGVALEKQEIIDYLKEVIPVVVQLARLPDGRRVVSEIVFTKGDTL*