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SCNpilot_expt_1000_bf_scaffold_2167_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(5099..5617)

Top 3 Functional Annotations

Value Algorithm Source
Protein VdlD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWY0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 165.0
  • Bit_score: 305
  • Evalue 2.40e-80
Acyl-CoA hydrolase {ECO:0000313|EMBL:EYR78754.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 165.0
  • Bit_score: 305
  • Evalue 3.40e-80
thioesterase superfamily protein similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 172.0
  • Bit_score: 283
  • Evalue 5.30e-74

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGACGCCGATCGAGCAGGATCCCCGCCGCCTGGACATGACCGTTTTGATGACGCCCGACATGGCGAATTTTTCGGGGAAGGTCCACGGCGGCGCGTTGCTGAACCTGCTCGATCGCGTTGCCTTCTCCTGCGCCTCGCGCTATTCGCGGCAATATGCGGTGACGCTCTCCGTCGATCAGGTGATGTTCAAGGAGCCGATCCATGTCGGCGAACTCGTGACGTTTCGTGCCTCGGTCAACCATACCGGCCGGACGTCGATGGAGATCGGCATCCGGGTCGAGGCGGAAAACATCCGCTCCAGCCACCGCCGACACACCAATTCCTGCTATTTTTCGATGGTCGCCGTCGATGATGCGGGCAAACCCGTGCCTGTGCCGGAACTGCGGCCGACCGATGCGGTGGATATCCGTCGCTACAAGGCGGCCGAACTTCGCCGCACGTTGCGTCGCGAATTCGCCGAGCGGCTTGAATCGGTCGCGGCGACGGGCAGGGATGTCGATCGGTCGGAAGGCGACTGA
PROTEIN sequence
Length: 173
MTPIEQDPRRLDMTVLMTPDMANFSGKVHGGALLNLLDRVAFSCASRYSRQYAVTLSVDQVMFKEPIHVGELVTFRASVNHTGRTSMEIGIRVEAENIRSSHRRHTNSCYFSMVAVDDAGKPVPVPELRPTDAVDIRRYKAAELRRTLRREFAERLESVAATGRDVDRSEGD*