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SCNpilot_expt_1000_bf_scaffold_1782_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1984..3120

Top 3 Functional Annotations

Value Algorithm Source
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 378.0
  • Bit_score: 715
  • Evalue 4.10e-203
spermidine/putrescine ABC transporter ATPase; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31] similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 365.0
  • Bit_score: 354
  • Evalue 5.40e-95
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGY4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 378.0
  • Bit_score: 715
  • Evalue 2.90e-203

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
ATGGCCATGGTAATGACGAGCGGATCAAGAAAAGCATACGCAGGTGAGCAAAACGCAGTTCGCTTCCATGGCGTGAGCAAGCGTTTCGGTGAAGGCCCGCATGCGCTGACGGTCATTCGCGATCTCAACCTGACGATCGGGAAGGGCGAGTTCTTCTCTCTGCTCGGCCCCAGCGGGTGCGGCAAGACGACGGCCCTGCGCATGATCGGCGGCTTCGAGCATCCGAGCGAGGGCGATGTGCTGCTGGATGGCGAGAGCATCATCGGCGTGCCGCCCTACCGGCGCGACGTCAACATGGTCTTCCAGTCCTATTCGCTGTTCCCGCATATGGATGTCTATGAGAATATCGAGTACGGACTGCGCCGCAAGAAGGTCCCGCGCCAGGAACGGCGCAAGCGGATTGCCGATGTCGTCGCGCTTGCCCAGCTCGACGACTATGTCGCGCGGCGTCCGAACCAGTTGTCCGGGGGCCAGCAGCAGCGCGTCGCGCTCGCTCGCGCGCTCGTCAATCAGCCGAAGGTACTGCTGTTGGACGAACCACTCGCGGCGCTCGACGCCAAGCTTCGCGGCACGATGCAGGAGGAACTCCGCCGCATTCAGCGCGAGGTCGGTATTACCTTCGTTTTCGTCACGCATGACCAGCAGGAGGCGTTTGCCTTGTCGGATCGCGTCGCGGTAATGCGTGCGGGCCGTCTGGAGCAGGCCGGGACGCCACTGGAACTTTACAACAAGCCCGCCACCCGCTTCGTCGCCGATTTCGTCGGGCAGTCGAATTTCATCAGCGGACCGGTTTGCAGTATGGCGCCTTGCCTTCTCGAACTGGGGCAGGAAGGAGACCGCGTCTTTCTTCCCGCGGAAGCGCCCGGTACGGCAGCCACGATCGTCGTTCGGCCGGAGCAGATCGCCTTGCATGCGGACCAGCCGGAATTGCAGGGTGAAAGCCGCTCCCGCCTCGCCGGGGTTGTGACTGAAAACACGTTTCTGGGTTCGAAACACGTCCTTCGGATCAAGACATGTCTGCCGGAACCGATCCTGGTCGAGGCCAGTCATGGCGCTGTCAGCGCGCTGGCCCCGGAACCGGGCCGTTCGCTCTGGCTCTCGTGGAGATCCGGCGAAGGCGCGTTGCTCGCCGACTGA
PROTEIN sequence
Length: 379
MAMVMTSGSRKAYAGEQNAVRFHGVSKRFGEGPHALTVIRDLNLTIGKGEFFSLLGPSGCGKTTALRMIGGFEHPSEGDVLLDGESIIGVPPYRRDVNMVFQSYSLFPHMDVYENIEYGLRRKKVPRQERRKRIADVVALAQLDDYVARRPNQLSGGQQQRVALARALVNQPKVLLLDEPLAALDAKLRGTMQEELRRIQREVGITFVFVTHDQQEAFALSDRVAVMRAGRLEQAGTPLELYNKPATRFVADFVGQSNFISGPVCSMAPCLLELGQEGDRVFLPAEAPGTAATIVVRPEQIALHADQPELQGESRSRLAGVVTENTFLGSKHVLRIKTCLPEPILVEASHGAVSALAPEPGRSLWLSWRSGEGALLAD*