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SCNpilot_expt_1000_bf_scaffold_685_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 25666..26847

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Sinorhizobium medicae RepID=UPI00036BB9E4 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 393.0
  • Bit_score: 639
  • Evalue 2.80e-180
binding-protein-dependent transport system inner membrane protein; K02054 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 393.0
  • Bit_score: 638
  • Evalue 1.90e-180
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR60552.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 393.0
  • Bit_score: 638
  • Evalue 8.70e-180

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Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1182
ATGACCCGGCAGCCACGGCTCTCGAAACGCATCACATCCTTCGCGCTCATTGCGCCACTCGCTCTTTTCCTGGCGTTCTTCTTCGTGGCTCCCCTGGTCACGATGATGAAGACGGCGGTGTCCGATCCGGTTGCTTCGATTGCATTGCCGACCGTATCGGCGGCCTTGGATGGCTGGGATCGTGAAGGCGCTCCGCCTGTGGAGGCTCAGCAGGCTCTGGCGAACGACATCAGGAACGTCAGCAACGACGAGCTTTTCGGTGACCTGGTACGCCGCCTGAACAGTGCGAAATCCGGCTTCCGCACCCTGATGACGAAGACACGCAACGCCGTGATCGAGGACGCGAACCTCAACGATCTCGTCTCTGTCGATAGGCGCTGGTCCGATCCCGGTTTCTGGGTCGCGGTTCAGGATGCGGCGGGAGCGTCGCTGACCGATCGCAACCTGCTCGCCGCCGTCGATCTCCAGCGCGATGCCAACGGCGATATCATCGATGCGCCGGAGGGCACGTCCGCCAACCGCACCACCCTGTTCCGCACGATGATCATGGCGGGCATCGTGACCCTCTGCTGCATCGCGGTCGGGCTTCCGTTCGCGATGGTCGCGGCTTCGACGACGGGCTGGAAGCGTCAGCTTCTTCTTGGCGCCGTGCTCCTCCCGCTCTGGACCTCGCTGCTGGTGCGAACGGCGGCCTGGTACATCATCCTGCAGGATAACGGCTTGATCAACCTCACGCTGCAGACGCTGGGTTTGACGAACGGGCCGGTGCCCTTGATTTTCAACAGGCTTGGGGTCGTGATCGCGATGACGCACGTCCTGCTGCCGTTCATGGTGCTGCCGATCTTCAGCGTCCTGATCGGCATCCCCAAGAACCTGATGCCCGCCGCCGCATCGCTTGGCGCCCACCCGATCAGAGCTTTCCTCCTGGTGCTTCTGCCGCTCAGTCTGCGTGGCGTCGTCTCCGGCGCGCTCCTGGTGTTCATGAGTGCTCTCGGCTACTACATCACGCCCGCGCTCATCGGCGGCGCAAAGGACCAGATGATCAGCTCGGTGATCGCCTATTACGCAACCGGTGCTGCAAACTGGGGCATGGCCGGGGCTCTCGGCATCGTGCTCCTGGCCGCGACCATGATCCTCTACGTCGTCTATCTCCGTCTGTCCTCTGAGGAGGTGCGCACATGA
PROTEIN sequence
Length: 394
MTRQPRLSKRITSFALIAPLALFLAFFFVAPLVTMMKTAVSDPVASIALPTVSAALDGWDREGAPPVEAQQALANDIRNVSNDELFGDLVRRLNSAKSGFRTLMTKTRNAVIEDANLNDLVSVDRRWSDPGFWVAVQDAAGASLTDRNLLAAVDLQRDANGDIIDAPEGTSANRTTLFRTMIMAGIVTLCCIAVGLPFAMVAASTTGWKRQLLLGAVLLPLWTSLLVRTAAWYIILQDNGLINLTLQTLGLTNGPVPLIFNRLGVVIAMTHVLLPFMVLPIFSVLIGIPKNLMPAAASLGAHPIRAFLLVLLPLSLRGVVSGALLVFMSALGYYITPALIGGAKDQMISSVIAYYATGAANWGMAGALGIVLLAATMILYVVYLRLSSEEVRT*