ggKbase home page

SCNpilot_expt_1000_bf_scaffold_685_curated_27

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 26844..27629

Top 3 Functional Annotations

Value Algorithm Source
polyamine ABC transporter permease, partial n=1 Tax=Rhizobium giardinii RepID=UPI0003662C19 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 246.0
  • Bit_score: 443
  • Evalue 1.50e-121
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 261.0
  • Bit_score: 435
  • Evalue 9.70e-120
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR60553.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 261.0
  • Bit_score: 435
  • Evalue 4.30e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGAAAACACTTCCCGTCAGCAAGGCAGTCTTCGGGACGGCGGTCGTCATTTTCCTGATGGCGCCCCTGTTCGCCATCCTCCCGCTCGCGTTCACGGACAGCATCTTCCTGAACTACCCGATCCCCGGGTTCTCCTTCCGATGGTTCCATGAGCTGTTCACGGCCAACGCCTGGCGCTGGTCGATCCTGAACAGTCTGGTGATCGGCTGCGGCACGACGATCCTGGCGACCGTCCTTGGAACGATTGCTGCCCTTGGCCTGCGTGGAAACTCGGCATCGCTGTTTTTCAGTTTCTTCCGCACCGCCTTCCTGCTGCCGATGGTCGTTCCTGCCGTCGTTCTCGGGGTCGGCATGCAGCTGATGTTCGCTCAGTACGGGCTTGCCAATACCTATGTGGGCGTCATCATCGCCCATACGGTCATTGCCATCCCATTCGTGGTGGTCAATGTGACGGCAGCACTTCAGGGCATCGACCGTCGCCTGGAGAATGCGGCCGCGAGTCTGGGCGCATCCCCCGCTGTCGTTCTCCAGCAGGTGACGTTGCCTCTGGCGATGCCGGGGATCGTCTCCGGCGCGGTATTTGCCTTCGCCACCTCGCTGGATGAAGTCGTTCTGACCCTTTTCGTCGCAGGGCCCAACCAGCGAACCGTCGCTCGCCAGATGTTCTCGACGATCAGAGAGAACATCAGCCCTGCGATTGCCGCCGCCGCATTCCTCTTCATCGTCGGAACGGTTGTCATCGCGGGACTTGTCCTGCTGGCGCAAAAGAAGACCCAGCGGGCGTAA
PROTEIN sequence
Length: 262
MKTLPVSKAVFGTAVVIFLMAPLFAILPLAFTDSIFLNYPIPGFSFRWFHELFTANAWRWSILNSLVIGCGTTILATVLGTIAALGLRGNSASLFFSFFRTAFLLPMVVPAVVLGVGMQLMFAQYGLANTYVGVIIAHTVIAIPFVVVNVTAALQGIDRRLENAAASLGASPAVVLQQVTLPLAMPGIVSGAVFAFATSLDEVVLTLFVAGPNQRTVARQMFSTIRENISPAIAAAAFLFIVGTVVIAGLVLLAQKKTQRA*