ggKbase home page

SCNpilot_expt_1000_bf_scaffold_685_curated_28

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(27880..28533)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D038C3 related cluster n=1 Tax=unknown RepID=UPI0003D038C3 similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 216.0
  • Bit_score: 374
  • Evalue 9.20e-101
TetR family transcriptional regulator {ECO:0000313|EMBL:ESZ10600.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 216.0
  • Bit_score: 374
  • Evalue 1.30e-100
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 213.0
  • Bit_score: 341
  • Evalue 2.10e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. L48C026A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGATGACCGACCAGACAGAAAAACCGGGACGCAAACCACGAATCCGCGATGCCGAAGCCACCAAGGCCCGCATTCTCGAAGCGGCGAAAAAAGAGTTTGCGAAGAATGGCTTGGGCGGTGCGCGGGTGGACGACATCGCCGAAAAGGCCAAGGCGAACAAGCGGATGATCTACCACTATTTCGAGAGCAAGGAAGGCTTGTTCCAGACCGTGCTCGAGGAGGCTTACCTCGACATTCGCAGTGCCGAGCAGAAGCTGAATCTGGAGGATCTGGATCCCACCACCGCGCTCGAAAGGTTGGTCCGCTTCACATGGGAATACTACCTCAGGAATCCGGAATTCCTGACGCTGGTCAACAGCGAGAACCTGCATCGGGCGAAGCATTTGAAGAAATCGGAGATCGTCAAATCCTCCAGCCGCAAGCTGGTCGGCATGGTCTCGGATATCCTTGAGCGTGGCGTCAAGGCAGGCGTCTTCCGCCACGGCATTGATCCCGTGCAACTCAACATCACGATCGCCGCCGTCGGATACTACTATCTGACCAACCGCTTCACCGGTTCGATCATTTATGAGCGAGACCTTATGGCCAAGGAAGCCCTGGAGGAGCGCATCCGGTTCAACATCGAAACGATCATGCACCTGGTCGCGGCTTGA
PROTEIN sequence
Length: 218
MMTDQTEKPGRKPRIRDAEATKARILEAAKKEFAKNGLGGARVDDIAEKAKANKRMIYHYFESKEGLFQTVLEEAYLDIRSAEQKLNLEDLDPTTALERLVRFTWEYYLRNPEFLTLVNSENLHRAKHLKKSEIVKSSSRKLVGMVSDILERGVKAGVFRHGIDPVQLNITIAAVGYYYLTNRFTGSIIYERDLMAKEALEERIRFNIETIMHLVAA*