name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_685_curated_1
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..741
|
Oxidoreductase, FAD-binding; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
Oxidoreductase, FAD-binding n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7A5_HYPSM
Oxidoreductase, FAD-binding {ECO:0000313|EMBL:CCB67215.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
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|
SCNpilot_expt_1000_bf_scaffold_685_curated_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
741..992
|
Oxidoreductase, FAD-dependent n=1 Tax=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) RepID=Q4KJD8_PSEF5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_3
Pseudomonas protegens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
989..2257
|
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Pseudomonas fluorescens RepID=UPI0002E1EF1C
pyridine nucleotide-disulfide oxidoreductase
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AAY95909.1}; TaxID=220664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2257..3663
|
Glycerol kinase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7A7_HYPSM
Glycerol kinase {ECO:0000313|EMBL:KGM30179.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_5
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3818..5002)
|
(S)-2-hydroxy-acid oxidase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BC61_PARDP
2-hydroxy-acid oxidase {ECO:0000313|EMBL:KGJ02626.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_6
Pseudomonas cremoricolorata, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5053..6426)
|
FAD/FMN-containing dehydrogenase n=1 Tax=Congregibacter litoralis KT71 RepID=A4ADA5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AIR90656.1}; TaxID=157783 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cremoricolorata.;"
FAD linked oxidase
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_7
Pseudomonas cremoricolorata, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6431..7210)
|
Alpha-dehydro-beta-deoxy-D-glucarate aldolase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7FA08_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AIR90657.1}; TaxID=157783 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cremoricolorata.;"
4-hydroxy-2-oxovalerate aldolase
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_8
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7230..8039)
|
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D74BA
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:AEH90597.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8053..8709)
|
UPI0003CFC3A6 related cluster n=1 Tax=unknown RepID=UPI0003CFC3A6
ABC transporter permease {ECO:0000313|EMBL:ESZ22512.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_10
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8841..9617)
|
Amino acid ABC transporter n=2 Tax=Labrenzia RepID=U7G7R8_9RHOB
Amino acid ABC transporter {ECO:0000313|EMBL:ERP93547.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
periplasmic binding ABC transporter protein; K02030 polar amino acid transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_11
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9644..10405)
|
Amino acid ABC transporter, ATP-binding protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HKA0_9RHIZ
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHK58820.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC-type histidine transport system, ATPase component
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10525..11466
|
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000370C08B
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDX44452.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_13
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11471..12310)
|
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI000379305E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR64034.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_14
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12329..13792)
|
NAD-dependent aldehyde dehydrogenase (EC:1.2.1.16)
NAD-dependent aldehyde dehydrogenase n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IPN6_RHIML
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJF72728.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_15
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13809..15008)
|
alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:ABR64036.1}; EC=1.1.1.1 {ECO:0000313|EMBL:ABR64036.1};; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
Alcohol dehydrogenase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UK56_SINMW
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_16
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15029..16033)
|
(R)-2-hydroxyacid dehydrogenase (EC:1.1.1.272)
dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI00037320E0
(R)-2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:EHK74345.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_17
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16134..16820
|
GntR family transcriptional regulator n=1 Tax=Sinorhizobium medicae RepID=UPI0003771A61
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABR64038.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_18
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16817..18412
|
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter ATP-binding protein n=1 Tax=Sinorhizobium medicae RepID=UPI00037833A9
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJF72724.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_19
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18375..19373
|
ABC transporter permease n=1 Tax=Rhizobium meliloti RepID=UPI00036E3379
ABC transporter permease {ECO:0000313|EMBL:KJF72723.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
ABC transporter; K10440 ribose transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_20
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19420..20385
|
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UK61_SINMW
putative ABC transporter, periplasmic solute-binding protein; K10439 ribose transport system substrate-binding protein
Putative ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:ABR64041.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_21
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20448..21035
|
PfpI family intracellular peptidase; K05520 protease I [EC:3.2.-.-]
Intracellular protease, PfpI family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UK62_SINMW
Intracellular protease, PfpI family {ECO:0000313|EMBL:ABR64042.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_22
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21323..22621)
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23]
histidinol dehydrogenase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000381B01B
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_23
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22799..23347
|
aldehyde dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI000366347E
XRE family transcriptional regulator protein PuuR 1 {ECO:0000313|EMBL:AIC29974.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
XRE family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_24
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23454..24494
|
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI0003782F29
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABR60550.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_25
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24605..25669
|
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
ABC transporter ATP-binding protein n=1 Tax=Rhizobium meliloti RepID=UPI00036ED5DD
spermidine/putrescine ABC transporter ATPase; K02052 putative spermidine/putrescine transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_26
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25666..26847
|
ABC transporter permease n=1 Tax=Sinorhizobium medicae RepID=UPI00036BB9E4
binding-protein-dependent transport system inner membrane protein; K02054 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR60552.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_27
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26844..27629
|
polyamine ABC transporter permease, partial n=1 Tax=Rhizobium giardinii RepID=UPI0003662C19
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR60553.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_28
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27880..28533)
|
UPI0003D038C3 related cluster n=1 Tax=unknown RepID=UPI0003D038C3
TetR family transcriptional regulator {ECO:0000313|EMBL:ESZ10600.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_29
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28775..29890
|
UPI0003CFE126 related cluster n=1 Tax=unknown RepID=UPI0003CFE126
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESZ10601.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_685_curated_30
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30036..31001
|
UPI0003CFACD7 related cluster n=1 Tax=unknown RepID=UPI0003CFACD7
ABC transporter permease {ECO:0000313|EMBL:ESZ10602.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
ABC transporter permease
|