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SCNpilot_expt_1000_bf_scaffold_2766_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(14682..15797)

Top 3 Functional Annotations

Value Algorithm Source
Leu/Ile/Val-binding protein 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZZ2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 371.0
  • Bit_score: 698
  • Evalue 3.60e-198
ABC-type branched-chain amino acid transport system periplasmic component {ECO:0000313|EMBL:EYR81545.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 371.0
  • Bit_score: 698
  • Evalue 5.10e-198
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 373.0
  • Bit_score: 597
  • Evalue 2.70e-168

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
ATGAAGCGCATTCTGATTATCGGCACGGCCATCGGCCTGCTCATGGGCACGGCGGCGCGCGCCGAGGATCTGACCTTCGCGGTGGCCGGCCCGCTGACCGGCCCGCTCGCCACCATCGGCGACCAGTTCCGGCAGGGCGCGCAGGCGGCGGCCGATGCCATCAACGCCAAGGGCGGCGTGATGGGCCGCAAGATCAAGCTGCAGTTCGAAGACGACCAGTGCGATCCGAAGCAGGCCGTTTCGGTCGCCAACCGCATTGCCGCCAGCGGCATCAATTTCGTCGACGGCCATGCCTGCTCGGGTTCGAGCATCCCGGCCTCCGCCGTCTATGCCGAAAACGGCACGCTGATGATGAGCCCGGCCTCCTCCAACCCGGTCATGACGGATGATGCCGCCGCCAAGGGCTGGACCAACATCATGCGCCTTTACACCCGCGACGATGCGCAGGGCGCCTTCATCGGCCCGTGGATCGCCAAGGAATATGCCGGCAAGAAGGTCGCCGTGCTGCATGACAAGACCGCCTATGGCCAGGGCGTCGCCGATGCGGTGCGCGCCACCATGAACGCCAGCGGCCTCAAGGAAACGCTCGCCGAAAGCATCAACCCCGGCGAAAAGGATTACAACGCGCTGGTGACGAAGCTGAAGGACGCCAAGATCGACGTCGTCTATTTCGGCGGCTACCACCCGGAAGCCGGCCTGATCCTGCGCCAGGCGGCCGAGCAGGGCTACAAGTTCCAGCTCATCATGCCCGATTCCATCGCCTCGCCGGAATTCTGGCAGGTTTCCGGTCCGGCTGGCGAAGGCACGCTGTTCGTCTTCCCCTCCGATCCGCAGGCCAAGCCCGAGGCGAAGGACGCCGCCGAGAAGATCAAGGCCGGCGGCTTCAAGCCGGAAGGCTTCACGCTGTTCTCCTACGCCGTCATCCAGGCCTTCGCGCAAGGCATCGAACGCGCCGGCTCCGACGATCCGACCAAGGTCGCGGCTGCCTTGAAGGACGGCCAGCCGATCGACACCGTCGTCGGCACCGTCACTTTCGACGAGAAGGGCGACCTGAAGAACGCCAGCTACGACATCAACCGCTGGAGCAACGGCGCCTACGCACCGATCGCGAAATAA
PROTEIN sequence
Length: 372
MKRILIIGTAIGLLMGTAARAEDLTFAVAGPLTGPLATIGDQFRQGAQAAADAINAKGGVMGRKIKLQFEDDQCDPKQAVSVANRIAASGINFVDGHACSGSSIPASAVYAENGTLMMSPASSNPVMTDDAAAKGWTNIMRLYTRDDAQGAFIGPWIAKEYAGKKVAVLHDKTAYGQGVADAVRATMNASGLKETLAESINPGEKDYNALVTKLKDAKIDVVYFGGYHPEAGLILRQAAEQGYKFQLIMPDSIASPEFWQVSGPAGEGTLFVFPSDPQAKPEAKDAAEKIKAGGFKPEGFTLFSYAVIQAFAQGIERAGSDDPTKVAAALKDGQPIDTVVGTVTFDEKGDLKNASYDINRWSNGAYAPIAK*