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SCNpilot_expt_1000_bf_scaffold_2766_curated_17

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(16397..19204)

Top 3 Functional Annotations

Value Algorithm Source
Sarcosine oxidase subunit alpha {ECO:0000313|EMBL:EYR81547.1}; EC=1.5.3.1 {ECO:0000313|EMBL:EYR81547.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 937.0
  • Bit_score: 1616
  • Evalue 0.0
sarcosine oxidase subunit alpha family protein; K00302 sarcosine oxidase, subunit alpha [EC:1.5.3.1] similarity KEGG
DB: KEGG
  • Identity: 65.2
  • Coverage: 957.0
  • Bit_score: 1217
  • Evalue 0.0
Sarcosine oxidase subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D4C7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 937.0
  • Bit_score: 1616
  • Evalue 0.0

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2808
ATGACGGCATGGCGTACTGAGGGCGGCTCCGCCATCGACCGCGCGCGGTCGCTGCGCTTCACCTTCGACGGGCGCGTGATCGAAGGCTTTGCCGGCGATACGGTCGCCTCGGCGCTGTTGGCCGGCGGTGTTTCCGTGCTCGGCCGCAGCTTCAAATATCATCGCCCGCGCGGCCTCTGGGGCGCCGGCGTCGAGGAGCCGAATGCGCTGGTCGATATCGCCGGCGACATGCCGAACACCCGCGCCACGCAGGCGCTTGCCGTCGATGGCATGGCCGTGCGCAGCGTCAATGCCGATCCGAGCGCCGAGAAGGATCGCCATGCCTTCCTCGATGCCTTCGCGCGCTTCATCCCGGCCGCTTTCTACTACAAGACCTTCATGGTCCCGGACTGGCATTCGTTCGAGCCGCGCATCCGCCAGATGGCGGGTCTGGGTGTACTGGACGAAGCGATTCAAAGCCCGGCTTTCGCCGAGCAGATCAACCACCATTGCGATGTGCTGGTGGTCGGCGCCGGGCCGGCGGGCCTGCTCGCCGCCCGCACGGCGCAGCGCGCCGGAAAACGCGTGCTTCTCTGCGACGACGGCCGGCAGGTCGGCGGCAGCCTGTTGTTTCGCGAGGGCGCCATCGAGGGAAAAGCCGGTGCCGATTGGGCTGCGGATGTGGCGGCGGAACTGGCCGAGGCCGGCGCTCTGGTGCTGACCGGCACGACGGCCTTCGGCATCTACGACCATCATCTCGTCGGCCTCAACCAGAAGGGCGCGGATGGTGCGCCGGACCGCTTGTGGCGCGTCCGCTCGACATCGATCGTGCTGGCGACAGGCGCCATCGAGCGCCCCTTGCCTTTCAGCAACAACGACCTGCCGGGCATCATGTCGGCGGAGGCCGCGCTCGTCTATCTGCGTCGCTTCGGCATCGTCGCCGGGCGCAAGGTGATGATCGCTACGAATAACGGTCTGGCCTATGAGACGGCGCAAGCGCTGGCGGCGGCCGGGGCGGATGTCACCGTCGTCGATTATCGCGCCGATGTCCCGGCACCGGCCGGCCTTCGCGTGTTGAAGGGGCGCACCATCGTTTCCGCAACAGGTCGCGGCGCGGTCAACGCCGTCAAACTCTCCGACGGCAGCGTTCTGGAAACCGATGCCGTGCTTGCCTCCGGCGGCTTCACGCCAAGCGTGCATCTCTATTGCCAGGCGCAGGGCAAGCTGGATTGGCGCGACGATATCCTGGCCTTCGTTCCCGGCCGGCCGGTTGACGGTGTCGACGTGGTCGGGGCCGCCGCAGGCGATTTCAAGCTTCCGGCGGAGATTGGCGCGACGGAAGGCCGGGAATTCGGCATCGTCGCCGCTTGGCCGAAGCCAAACTCCAAGGAACGGGTCTGGATCGATCTCCAGAACGACGTCACCGCCAAGGATGTCGAACTCGCCGTGCGCGAAAATTTCGTCTCCGTCGAGCATCTGAAGCGCTACACGACGCTCGGCATGGCGACGGACCAGGGCAAGACCTCGAATGTCAACGGTCTGGCGCTGATGGCGGAACTCACCGGCCGGCGCATTCCCGAGGTCGGCACCACCACCTATCGTCCGCCCTTCACGCCGGTGCCGCTCGCCTCCTTCGCCGGTGCGCGCTCCGGCACGCGCATGAAGCCGTTGCGCCGCCTGCCGCTGGAACAGCAGCATCGGGCCGATGGCGCGGTGTTTCGCGATTACGGCGGCTGGCTGCGCCCGGCCTATTACGGGGACGGCGCGCCGGACGAACGCATCCAGGCCGAAGCGCGGGCGGCGCGCAACGGTGTCGCGTTGTTCGATGGCTCGCCGCTCGGCAAGATCGAGGTGATCGGGCCGGATGCCGCGCCTTTCCTCGATTTCATCTATTACAACACCATGTCGACGCTGGCGCCCGGCCGCTGCCGCTACGGTTTCATCCTGACCGAGGGCGGCAATGTCTATGACGACGGCGTTCTGGTGCGGCTCGATGAAAACCGGTTCGTCGTGTCCTGCTCTTCTTCGCATGTCGCGGGCGTGCATGGTCTGCTGGAGGAATGGCGGCAGGATCGTTTCGACAAGCGGCGGATTTTCATCCACAACGCCACCGCCGAAATGGCGACATTGACGGTCACAGGCCCGAAGGCGCGGGCGCTGATGGAGGTGCTCGACCTCGGCATCGCGCTCGACGATACGGCCCTGCCGCATATGGCCGTCGTTTCAGGCGTCTTCGAAGGGGTCGCGCTGCGCATCGCCCGCATCAGCTTTACCGGCGAGCGCTCCTACGAGATCTCCGTGCCGGCCGATCGTGCGGTCGCGCTCTGGGCGCGGCTGCGGCAGGCGGGCGAGGCTTTTGGCGCGCGTTTGCTCGGGCTTGAGGCACTGATGATCCTGCGCGCCGAAAAGGGCTATATCGTCATCGGCAAGGATACGGATGGGACGAGCCGGCCGATGGATTTCGGCCTCACCGCGCCGCTGGAGCGCAAGAAGGTCGAGTTCATCGGCCGTCGCTCGCTGCTGACAGAGGATGCCGCCCTTGCAGATCGCCGGCAGTTCGTCGGGCTGGAGGCAATCGACGACAAAGGCCTGCTGCCGACCGGCGCGCACGGCATCGAGCCGTCATCGGCCGGCCTGCGCAGCACCGGCTACGTCACGTCGAGCTATTTCAGCCCGGCGCTGCAGAAGCCGATCGCGCTCGGGTTGATCGAGCGCGGCCTGTCACGCATGGGCGAGGTGATCGAGTTGCAGCATTTGCGCCAGATCCGGCGCGCCCGCATCGTCTCCGCCTGCGCCTTCGATGAGGAAGGGAGCCGCCTCCATGCTTGA
PROTEIN sequence
Length: 936
MTAWRTEGGSAIDRARSLRFTFDGRVIEGFAGDTVASALLAGGVSVLGRSFKYHRPRGLWGAGVEEPNALVDIAGDMPNTRATQALAVDGMAVRSVNADPSAEKDRHAFLDAFARFIPAAFYYKTFMVPDWHSFEPRIRQMAGLGVLDEAIQSPAFAEQINHHCDVLVVGAGPAGLLAARTAQRAGKRVLLCDDGRQVGGSLLFREGAIEGKAGADWAADVAAELAEAGALVLTGTTAFGIYDHHLVGLNQKGADGAPDRLWRVRSTSIVLATGAIERPLPFSNNDLPGIMSAEAALVYLRRFGIVAGRKVMIATNNGLAYETAQALAAAGADVTVVDYRADVPAPAGLRVLKGRTIVSATGRGAVNAVKLSDGSVLETDAVLASGGFTPSVHLYCQAQGKLDWRDDILAFVPGRPVDGVDVVGAAAGDFKLPAEIGATEGREFGIVAAWPKPNSKERVWIDLQNDVTAKDVELAVRENFVSVEHLKRYTTLGMATDQGKTSNVNGLALMAELTGRRIPEVGTTTYRPPFTPVPLASFAGARSGTRMKPLRRLPLEQQHRADGAVFRDYGGWLRPAYYGDGAPDERIQAEARAARNGVALFDGSPLGKIEVIGPDAAPFLDFIYYNTMSTLAPGRCRYGFILTEGGNVYDDGVLVRLDENRFVVSCSSSHVAGVHGLLEEWRQDRFDKRRIFIHNATAEMATLTVTGPKARALMEVLDLGIALDDTALPHMAVVSGVFEGVALRIARISFTGERSYEISVPADRAVALWARLRQAGEAFGARLLGLEALMILRAEKGYIVIGKDTDGTSRPMDFGLTAPLERKKVEFIGRRSLLTEDAALADRRQFVGLEAIDDKGLLPTGAHGIEPSSAGLRSTGYVTSSYFSPALQKPIALGLIERGLSRMGEVIELQHLRQIRRARIVSACAFDEEGSRLHA*