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SCNpilot_expt_1000_bf_scaffold_2766_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(19185..19469)

Top 3 Functional Annotations

Value Algorithm Source
sarcosine oxidase subunit delta family protein; K00304 sarcosine oxidase, subunit delta [EC:1.5.3.1] similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 126
  • Evalue 4.60e-27
Sarcosine oxidase delta subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5F030_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 193
  • Evalue 1.30e-46
Sarcosine oxidase delta subunit {ECO:0000313|EMBL:EYR81548.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 94.0
  • Bit_score: 193
  • Evalue 1.80e-46

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGCAGCTTTTTCCATGCCCCTTCTGCGGCCCGCGCAGCGAGAGCGAATTTCATTTCGGCGGCGATGCCGGCAACCATCGCCCGGAAGGGTTTCGCACCGTCACCGACGGCGAATGGACCGCCTATCTCTACGAGCGCAACAATCCGCGCGGGGCGGCGAACGAAATCTGGATGCACATGACCTGCGGCGAAATTTTCCGTATGGAGCGGGATACCGTGCATCACCGTGTGGCGCAGTCTTTCGCGCTCGGAGAGGGAGACGGCCATGACGGCATGGCGTACTGA
PROTEIN sequence
Length: 95
MQLFPCPFCGPRSESEFHFGGDAGNHRPEGFRTVTDGEWTAYLYERNNPRGAANEIWMHMTCGEIFRMERDTVHHRVAQSFALGEGDGHDGMAY*