ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1951_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(6099..6617)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F497_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 170.0
  • Bit_score: 260
  • Evalue 9.00e-67
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EHS52418.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 170.0
  • Bit_score: 260
  • Evalue 1.30e-66
cpaB; pilus assembly protein; K02279 pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 167.0
  • Bit_score: 258
  • Evalue 1.40e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
GTGGTGCGTATCCCCATGTTCGAGGGCGAGCCCGTGCGGGCGGAAAAGATCGCCGATTCCAACAGCCGGATCATGTCTTCCATCCTGCCGTCCGGCAAGCGCGCCGTCGCCACCGAGATCTCCGTCTCCACGGGCGCCGGCGGCTTCATCCTGCCCAACGACCGCGTCGACGTCATCATGGTGCGCAAGAACGACGAGGGCAGATTCCTGACCGAGACGGTGCTGGCCAATGTTCGCGTGCTCGCCGTCGACCAGCAGATCGAACAGAAGACGGACGGTTCCAAGACGGTGGTCGGCACCACCGCGACGCTGGAGCTGACCCCCGACCAGACACGGGTGATCGCGGTCGCGCAGCAGATGGCCGACCGGTTGACACTGGCGTTGCGTTCCGTGGCCGACGCCCAGGAAAGCGACACCACCGGTGCCGACTATCTCTTAACCGGCAGCAGCAGCGCGCCGTCCATTCAGGTGATCAAGTCCGGCGCGATCGTCAAATCCGCCGAAGGCAACAAGATGTGA
PROTEIN sequence
Length: 173
VVRIPMFEGEPVRAEKIADSNSRIMSSILPSGKRAVATEISVSTGAGGFILPNDRVDVIMVRKNDEGRFLTETVLANVRVLAVDQQIEQKTDGSKTVVGTTATLELTPDQTRVIAVAQQMADRLTLALRSVADAQESDTTGADYLLTGSSSAPSIQVIKSGAIVKSAEGNKM*