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SCNpilot_expt_1000_bf_scaffold_1951_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7009..7515)

Top 3 Functional Annotations

Value Algorithm Source
cpaA; prepilin peptidase; K02278 prepilin peptidase CpaA [EC:3.4.23.43] similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 168.0
  • Bit_score: 223
  • Evalue 6.40e-56
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000366B620 similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 168.0
  • Bit_score: 223
  • Evalue 1.60e-55
Flp pilus assembly protein CpaA {ECO:0000313|EMBL:GAJ94379.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 168.0
  • Bit_score: 228
  • Evalue 5.20e-57

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGTTCAGGCTGCCATTCTCATGGTGTTTCCGCTGTGTCTCGCGGTCGCTGCGATCAGCGACCTCCTGACGATGACGATCCCCAATCGCGTGTCCGCGATTCTGTTCGCATCCTTTTTGATCGTCGCTCCACTGGCCGGCCTGTCGCCGCAGGGAATCGCCCTGCATCTGATGGCCGGCCTCGTGGTGTTTTCCGTCTGTTTCTCGCTGTTTGCGATGAACGTGATGGGAGGCGGGGATGCCAAGCTGCTGACCGCTGCCGCCGTCTGGTTCGGATGGAACCAGGCGCTGATGCTGTTCGTCGTCTATGTCGGCTTCATCGGCGGCGCGGTCACGCTCCTGGTTCTGATGATCCGCGCCCGCGCCGATACCGTCATGGCGATGGGCATCCGACTGCCCGATTCGTTGTGCTCCGCCAAGAAAATCCCCTATGGCGTCGCCATCGGCATCGCCGGTTTCCTCGCGTTTCCGAACTCCCCCCTGGTGACGGCCGCCCTCGGCCATTGA
PROTEIN sequence
Length: 169
MVQAAILMVFPLCLAVAAISDLLTMTIPNRVSAILFASFLIVAPLAGLSPQGIALHLMAGLVVFSVCFSLFAMNVMGGGDAKLLTAAAVWFGWNQALMLFVVYVGFIGGAVTLLVLMIRARADTVMAMGIRLPDSLCSAKKIPYGVAIGIAGFLAFPNSPLVTAALGH*