ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1389_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3269..3949)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Rhizobium sp. CF080 RepID=J2ITX2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 225.0
  • Bit_score: 401
  • Evalue 7.30e-109
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EUB98630.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 225.0
  • Bit_score: 401
  • Evalue 1.00e-108
polar amino acid ABC transcriptional regulator inner membrane protein; K10009 cystine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 226.0
  • Bit_score: 393
  • Evalue 3.70e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGCCGCACTGGCTTCAACTGATGGCGGACTCGCTGCCCACGCTGTTGTGGGCGGGCGTGAAATTCACGATTCCGCTGACCCTGCTTTCCTTCGTGCTCGGCCTGGCGCTCGGCCTGCTCACTGCCGTCACCAGATTGTTTGCGCCCCTGCCGTTCGCGCTTCTGGCACGCGGCTATGTCTGGATCATCCGCGGCACGCCGCTTCTCGTGCAGCTCTTCGTCGTCTTCTACGGCCTGCCGAGCGTCGGCATCCTGCTCGATGCCTTTCCCGCGGCCCTGATCGGCTTCACCCTCAATATCGGCGCCTATTCCTCGGAAATCATCCGCGCCGTCATCTCCTCGGTACCGAAGGGGCAATGGGAGGCGGCCTATTCCATCGGCATGAGCTGGAGCCAGGCGATGCGCCGCACCATCCTGCCGCAGGCGGCGCGCGTTGCCGTGCCGCCGCTGTCCAACACCTTCATCTCGCTGGTCAAGGATACGTCTCTGGCCGCAGCCATCACCGTGCCGGAGATGTTCCAAGCCGCGCAGCGCATCGTCGCCACCACCTATGAGCCGCTCATCCTTTATATCGAGGCGGCGCTGATCTATCTGGCGCTGAGCTCGGTGCTGTCGAACCTGCAGGTGCGGCTGGAGCGGCGCTTCGCGCGCTATGGCGGCATGCTGGAGACCAACACATGA
PROTEIN sequence
Length: 227
VPHWLQLMADSLPTLLWAGVKFTIPLTLLSFVLGLALGLLTAVTRLFAPLPFALLARGYVWIIRGTPLLVQLFVVFYGLPSVGILLDAFPAALIGFTLNIGAYSSEIIRAVISSVPKGQWEAAYSIGMSWSQAMRRTILPQAARVAVPPLSNTFISLVKDTSLAAAITVPEMFQAAQRIVATTYEPLILYIEAALIYLALSSVLSNLQVRLERRFARYGGMLETNT*