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SCNpilot_expt_1000_bf_scaffold_1389_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4047..4820)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0W7P8_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 257.0
  • Bit_score: 444
  • Evalue 6.60e-122
L-cystine ABC transporter substrate-binding protein TcyA {ECO:0000313|EMBL:AJC81526.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 257.0
  • Bit_score: 445
  • Evalue 4.10e-122
family 3 extracellular solute-binding protein; K02424 cystine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 257.0
  • Bit_score: 440
  • Evalue 3.90e-121

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 774
ATGAACTGGTTGAAAACGCTCGCAGCAGCGGCACTTCTTCAGGCGGCCGCGCTCACGCCTGCGCTTGCCGGCGACGATCTCGCCGCCATCAAGTCGGCCGGCGCCATCAAGATCGGCACCGAAGGCACCTATGCGCCCTTCACCTATCACGACACCAGCGGCAAGCTGGTCGGTTTCGACGTCGAGATCGGCGAGGCGATCGCCGCAAAGCTCGGCGTCAAGGCCGAGTTCATCGAGGGCAAATGGGACGGGTTGATCGCCGGTCTCGACGCCAAGCGCTACGATACGGTCATCAATCAGGTCGGCATCACTGACGCGCGCAAGCAGAAATATGATTTCTCCGAGCCCTACATCGCCTCCAAGGCGGTGCTGATCGTGCGCGCCGACGATAACGACATCAAGAACTTCGAGGATCTGAAGGGCAAGAAGTCGGCCCAGTCGCTGACCAGCAATTTCGGCAAGCTCGCCGAAGCCGCCGGCGCCGAACTGGTCGGCACCGACGGTTTCGACCAATCGATCCAGCTGGTGCTGACCGGCCGTGCCGATGCCACCATCAACGACAGCCTCTCCTTCCTCGATTTCAAGAAGCAGAAGCCGGATGCACCGGTGAAGATCGCCGCCGAGAAGGGCGATGCCGATTATTCCGGCATCATCATCCGCAAGGGCGAGCCGGAGCTGCTGGAGGCGATCAACAAGGCGCTGGCCGACATCAAGGCCGACGGCACCTACCAGAAAATCTCCGACACCTATTTCGGGCAGGACGTGTCCAAGTAA
PROTEIN sequence
Length: 258
MNWLKTLAAAALLQAAALTPALAGDDLAAIKSAGAIKIGTEGTYAPFTYHDTSGKLVGFDVEIGEAIAAKLGVKAEFIEGKWDGLIAGLDAKRYDTVINQVGITDARKQKYDFSEPYIASKAVLIVRADDNDIKNFEDLKGKKSAQSLTSNFGKLAEAAGAELVGTDGFDQSIQLVLTGRADATINDSLSFLDFKKQKPDAPVKIAAEKGDADYSGIIIRKGEPELLEAINKALADIKADGTYQKISDTYFGQDVSK*