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SCNpilot_expt_1000_bf_scaffold_2071_curated_17

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(17018..18514)

Top 3 Functional Annotations

Value Algorithm Source
Succinate-semialdehyde dehydrogenase GabD {ECO:0000313|EMBL:EYR83094.1}; EC=1.2.1.79 {ECO:0000313|EMBL:EYR83094.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 498.0
  • Bit_score: 904
  • Evalue 8.20e-260
PutA, NAD-dependent aldehyde dehydrogenase; K15786 aspartate-semialdehyde dehydrogenase [EC:1.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 498.0
  • Bit_score: 844
  • Evalue 1.30e-242
Succinate-semialdehyde dehydrogenase GabD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX39_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 498.0
  • Bit_score: 904
  • Evalue 5.90e-260

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1497
ATGACCGCCGTATTCGCCCGCACGAGTTTTCACGATGCGCTTGCACGTCTGACCGATCCGCATCTGCTGCGCGAACTGTCCTATGTCGGCGGACGCTGGATCGCCGGCCGCGACGGCAAGAGTTTTCGCGTGACCGATCCGGCCTCGGACGCGACGCTCGCCTGGGTCGCCGCGCTCGACGGCGAGCAGACATCGGAAGCGATTTCCGCTGCCGCGCAGGCTTTCCCCGCCTGGCGGGACATGCTGCCGCAACAGCGCGCGACGATCCTGCGCAAATGGCACGGCCTGGTGCTGGAAGCGCGCGAAGACCTCGCCTTGCTGATGACGCTGGAGCAGGGCAAGCCGCTGGCCGAGTCGCGCGGCGAGATCGACTACGCGGCCTCCTTCATCGAATGGTATGCCGAGGAGGGAAAACGCCTCAATGCCGAGAGCGTCACCAGCCATTTGCCGGGCGCTGAGATGATCGTGCGCCGCGAGGCGCTCGGCGTCGTCGGTGTCGCCACACCGTGGAATTTCCCCTCCGCGATGATCACCCGCAAGGTGGCGGCGGCCCTTGCCGCCGGCTGCACCGTCGTTGCCCACCCCTCCAGCGAAACGCCGCTTTCGGCGCTTGCCCTTGCCGAACTCGGCGAGCGCGCCGGCCTGCCAGCCGGCGTTTTCAACGTGGTGACCGGCGATGCCGCCACCATCGTCGGGCGCATGAATGCCGATGCGCGCATCCGCGCCATGAGCTTCACCGGCTCGACGGAGATCGGCAAGCTCATCGCCGGCCAATGCGCCCCGACCATGAAGCGGCTGGTCATGGAACTCGGCGGCCATGCACCACTGATCGTCTTCGCCGATGCCGATATCGGCAAGGCGGCGGACATCGCCGTCAACGCCAAGTTCGCGACATCGGGCCAGGATTGCCTCGCAGCCAACCGCATCTATGTCGAGCGCCCCATCCTGGCGGCCTTCACAAGAGCCTTCAAGGCGCGCATCGAGGCACTGAAAGTCGGAGCCGGGCTGGAGCCGGAGGTCGAACTCGGCCCGCTGATGCACGAGCGCGCTATCGCCAAGGTCGAGGAACAGGTCGCCGATGCGGTCAAGCGTGGCGCGAAGCTGCTCACCGGCGGCAAGCGCCACGAAGCCGGCCCGCTGTTCTACGCGCCGACGCTTCTGGCGGATGTTCCCGACGACGCTCTCATCATGCGCGAGGAAACATTCGGCCCCGTTGCCGCCGTCACCGCCTTCGACACCGAGGTGGAGGTCGTCGCCCGCGCCAACGATACCGAATACGGCCTCGTCGCCTATGTGGTTACCGAAAACGGCGCCCGGCAGATGCGCCTTGCCCGGGCGCTGGAAGTCGGCATGGTGGCTGTCAACCGGGTGAAGATCACCGGCGGGCCGATCCCCTTCGGCGGCTGGAAACAATCCGGCCTCGGCCGCGAAGGCGCGCGCCACGGCATGGAAGCCTTCACCGAACTCAAATATCTCTGCATCGACACCGCTGCCTGA
PROTEIN sequence
Length: 499
MTAVFARTSFHDALARLTDPHLLRELSYVGGRWIAGRDGKSFRVTDPASDATLAWVAALDGEQTSEAISAAAQAFPAWRDMLPQQRATILRKWHGLVLEAREDLALLMTLEQGKPLAESRGEIDYAASFIEWYAEEGKRLNAESVTSHLPGAEMIVRREALGVVGVATPWNFPSAMITRKVAAALAAGCTVVAHPSSETPLSALALAELGERAGLPAGVFNVVTGDAATIVGRMNADARIRAMSFTGSTEIGKLIAGQCAPTMKRLVMELGGHAPLIVFADADIGKAADIAVNAKFATSGQDCLAANRIYVERPILAAFTRAFKARIEALKVGAGLEPEVELGPLMHERAIAKVEEQVADAVKRGAKLLTGGKRHEAGPLFYAPTLLADVPDDALIMREETFGPVAAVTAFDTEVEVVARANDTEYGLVAYVVTENGARQMRLARALEVGMVAVNRVKITGGPIPFGGWKQSGLGREGARHGMEAFTELKYLCIDTAA*