name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2071_curated_1
unknown
|
Not on your lists |
1..102
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_2
unknown
|
Not on your lists |
comp(99..263)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_3
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1483..1785)
|
Antibiotic biosynthesis monooxygenase n=1 Tax=Burkholderia graminis C4D1M RepID=B1GAV9_9BURK
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EDT06723.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_4
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1840..2259)
|
Dimethylmenaquinone methyltransferase n=1 Tax=Burkholderia graminis C4D1M RepID=B1GAV8_9BURK
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EDT06722.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_5
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2629..3642)
|
Zinc-binding alcohol dehydrogenase family protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1GAV7_9BURK
NADPH:quinone reductase {ECO:0000313|EMBL:KJC46336.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
zinc-binding dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3788..4978)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000369FBE9
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44202.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
Peptidase
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_7
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5091..5627)
|
oxidoreductase; K09024 flavin reductase [EC:1.5.1.-]
Flavin reductase domain protein FMN-binding n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9I8_9BURK
Flavin reductase domain protein FMN-binding {ECO:0000313|EMBL:EDT07179.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_8
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5692..6588)
|
putative pigment protein; K16047 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase subunit HsaA [EC:1.14.14.12]
Acyl-CoA dehydrogenase type 2 domain n=2 Tax=Burkholderia graminis C4D1M RepID=B1G9I7_9BURK
Acyl-CoA dehydrogenase type 2 domain {ECO:0000313|EMBL:EDT06719.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_9
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7061..7702
|
Transcriptional regulator, TetR family n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9M3_9BURK
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDT07209.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_10
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7763..8965
|
Acyl-CoA dehydrogenase type 2 domain n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9I6_9BURK
Acyl-CoA dehydrogenase type 2 domain {ECO:0000313|EMBL:EDT07177.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
pigment protein
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_11
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9177..10256
|
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9L1_9BURK
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EDT07197.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
rbsB; ribose ABC transporter periplasmic protein; K10543 D-xylose transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_12
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10276..11862
|
ABC sugar transporter, fused ATPase subunits; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9L0_9BURK
ABC transporter related {ECO:0000313|EMBL:EDT07196.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_13
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11859..13061
|
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EDT07174.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EDT07174.1};; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
monosaccharide-transporting ATPase (EC:3.6.3.17); K10544 D-xylose transport system permease protein
Monosaccharide-transporting ATPase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G9I3_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_14
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14457..15143
|
Amidase {ECO:0000313|EMBL:KJC43566.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KJC43566.1};; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
amidase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003629C09
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15309..15476)
|
Acetylornithine deacetylase {ECO:0000313|EMBL:CDX45068.1}; EC=3.5.1.16 {ECO:0000313|EMBL:CDX45068.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15610..16983)
|
Putative aminotransferase y4uB {ECO:0000313|EMBL:EYR83095.1}; EC=2.6.1.- {ECO:0000313|EMBL:EYR83095.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Adenosylmethionine--8-amino-7-oxononanoate transaminase; K15785 L-2,4-diaminobutyrate transaminase [EC:2.6.1.-]
Putative aminotransferase y4uB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSG0_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17018..18514)
|
Succinate-semialdehyde dehydrogenase GabD {ECO:0000313|EMBL:EYR83094.1}; EC=1.2.1.79 {ECO:0000313|EMBL:EYR83094.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
PutA, NAD-dependent aldehyde dehydrogenase; K15786 aspartate-semialdehyde dehydrogenase [EC:1.2.1.-]
Succinate-semialdehyde dehydrogenase GabD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX39_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18632..19120)
|
Leucine-responsive regulatory protein Lrp n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN04_9RHIZ
Leucine-responsive regulatory protein Lrp {ECO:0000313|EMBL:EYR83093.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transcriptional regulator; K15782 Lrp/AsnC family transcriptional regulator, regulator of ectoine-degradation genes
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_19
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19223..20608
|
Putative HTH-type transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C761_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:KDP74661.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
GntR family transcriptional regulator with aminotransferase domain
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_20
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20731..21516
|
Putative amino-acid ABC transporter ATP-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPY6_9RHIZ
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP74660.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ehuA; ABC-type ectoine/hydroxyectoine transport system,ATP binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_21
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21592..22428
|
Cystine-binding periplasmic protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7XHK0_SINMM
ehuB; Cystine-binding periplasmic protein precursor
Cystine-binding periplasmic protein {ECO:0000313|EMBL:AEH84026.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22500..23159
|
Putative amino-acid ABC transporter permease protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX44_9RHIZ
Putative amino-acid ABC transporter permease protein {ECO:0000313|EMBL:EYR78343.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
amino-acid ABC transporter permease protein y4tF
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_23
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23162..23824
|
Putative amino-acid ABC transporter permease protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN09_9RHIZ
Amino acid ABC transporter permease {ECO:0000313|EMBL:KDP74657.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
ectoine/hydroxyectoine ABC transporter permease EhuD; K02029 polar amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23824..24606
|
arylmalonate decarboxylase; K01799 maleate isomerase [EC:5.2.1.1]
Ectoine utilization protein EutA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C766_9RHIZ
Ectoine utilization protein EutA {ECO:0000313|EMBL:EYR78341.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_25
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24603..25586
|
Threonine dehydratase {ECO:0000313|EMBL:KDP74655.1}; EC=4.3.1.19 {ECO:0000313|EMBL:KDP74655.1};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Putative threonine dehydratase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPZ1_9RHIZ
eutB-3; ectoine utilization protein EutB 3
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25583..26575
|
Ornithine cyclodeaminase 1 {ECO:0000313|EMBL:EYR78339.1}; EC=4.3.1.12 {ECO:0000313|EMBL:EYR78339.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ectoine utilization protein EutC (EC:4.3.1.12)
Ornithine cyclodeaminase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSH0_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_27
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26610..27791
|
Ectoine utilization protein EutD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX49_9RHIZ
X-Pro dipeptidase {ECO:0000313|EMBL:KDP74653.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
dipeptidase; K15783 ectoine hydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_28
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27795..28757
|
Putative succinylglutamate desuccinylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CN16_9RHIZ
Putative succinylglutamate desuccinylase {ECO:0000313|EMBL:EYR78337.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ectoine utilization protein EutE
|
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_29
unknown
|
Not on your lists |
comp(28998..29363)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2071_curated_30
unknown
|
Not on your lists |
comp(29436..30560)
|
This feature has no annotations |