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SCNpilot_expt_1000_bf_scaffold_4257_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 7791..8573

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein PMI11_04307 n=1 Tax=Rhizobium sp. CF142 RepID=J2AV43_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 262.0
  • Bit_score: 332
  • Evalue 4.80e-88
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 262.0
  • Bit_score: 332
  • Evalue 6.70e-88
ATP-dependent DNA helicase Ku-type protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 262.0
  • Bit_score: 324
  • Evalue 2.40e-86

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGCGCGCCCGGCTTTCTGGAGAGGCTATCTGAAACTCTCGCTGGTGACGGCGGCAGTGACGCTGACGCCGGCGACGACGGAAAGCCGGAAAGTCCGCTTCCACATCCTCAATCGCGCCACCGGCAACCGGGTGACCAGCCGTTATGTCGACAGCATCACCCACCGGGCGGTGGCGGACCGGAACCAGGTGCGCGGCTATCCCAAGGGCGAAGACGATTACGTGCTGATCGAGGACGAGGAAATCGACGCGCTCGGCGTGGAAAGCACCCGCACCATCGATATCGACCGTTTCGTGCCCACCGACGCCATCGACTGGCTGTGGTACGAGCGGCCGCACTTCATGATGCCGGCCGACAAGGTCGGCATGGAGGCCTTCGCCGTCATCCGCGCCGCCATGGAGGCGAAGAAGGTCGCAGGCCTGTCGCGGCTGGTTCTCTACGGCCGCGAGCATCCGGTTGCGCTGGAACCCTGCGGCAAGGGCATCGTCGTCTGGACCCTGCATTATGCCGATGAGCTGCGCGAGGCGGAGCACGTCTTCGATGTACCGAAGAAACCGAAAAAAGACGCCGCCATGGACAAGCTGGTGAAGGCCGAACAGCTCGACTGGGCGCCTTCCCTGCTCGGCGACCCGGTGCAGCACAAGATCGAAAAGCTCCTGAGCGCCAAAACGAAGAAGCAGAAGACGAAACCGGCCCCCAAGCGCGCCGCCGCGCCGTCCGGCAAGGTCATCAACCTCATGGATGCGCTGAAGAAAAGCCTCGCCTCGGAAAAGCGCGGCTGA
PROTEIN sequence
Length: 261
MARPAFWRGYLKLSLVTAAVTLTPATTESRKVRFHILNRATGNRVTSRYVDSITHRAVADRNQVRGYPKGEDDYVLIEDEEIDALGVESTRTIDIDRFVPTDAIDWLWYERPHFMMPADKVGMEAFAVIRAAMEAKKVAGLSRLVLYGREHPVALEPCGKGIVVWTLHYADELREAEHVFDVPKKPKKDAAMDKLVKAEQLDWAPSLLGDPVQHKIEKLLSAKTKKQKTKPAPKRAAAPSGKVINLMDALKKSLASEKRG*