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SCNpilot_expt_1000_bf_scaffold_2579_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3830..5281)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen regulation protein NtrC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LIS1_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 483.0
  • Bit_score: 906
  • Evalue 8.80e-261
ntrC; nitrogen regulation protein NtrC similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 483.0
  • Bit_score: 906
  • Evalue 2.80e-261
Nitrogen regulation protein NtrC {ECO:0000313|EMBL:AGB71122.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 483.0
  • Bit_score: 906
  • Evalue 1.20e-260

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGACCGCCACGATCCTTGTCGCCGACGACGACGCCGCCATCCGCACGGTGCTGAACCAGGCCTTGAGCCGCGCGGGTTACGACGTGCGCATCACCTCCAATGCCGCGACGCTCTGGCGCTGGATCTCGGCCGGCGAGGGCGATCTCGTCGTCACCGACGTGGTCATGCCGGATGAGAACGCCTTCGATCTGCTGCCGCGCATCAAAAAGGCGCGGCCGGATCTGCCCGTGCTGGTGATGAGCGCGCAAAATACCTTCATGACCGCCATCAAGGCTTCCGAAAAGGGCGCTTACGACTACCTGCCCAAGCCCTTCGACCTCACCGAACTGATCGCCATCATCGGCCGTGCCCTTTCGGAGCCGAAGCGCCGGCCGGCCAAGCTGGAGGACGAATCGCAGGACGGAATGCCTTTGGTGGGCCGTTCCGCCGCCATGCAGGAAATCTACCGCGTGCTGGCGAGGCTGATGCAGACCGACCTGACGCTGATGATCACAGGCGAATCCGGCACCGGCAAAGAGCTGGTGGCGCGTGCCCTGCATGACTACGGCAAGCGTCGCAACGGCCCGTTCGTGGCGATCAACATGGCGGCGATCCCCCGTGACCTGATCGAATCGGAGCTCTTCGGCCATGAGAAGGGCGCCTTCACCGGCGCGCAGGCCCGCTCCACCGGGCGCTTCGAGCAGGCCGAAGGCGGAACGCTGTTTCTCGATGAAATCGGCGATATGCCGATGGATGCGCAGACGCGCCTGCTGCGCGTGTTGCAGCAAGGCGAATATACCACCGTCGGCGGACGCACCCCGATCCGCACCGACGTGCGCATCGTCGCGGCGACCAACAAGGATCTGAAACAGTCAATCAATCAAGGACTTTTCCGAGAAGACCTCTACTACCGCTTGAACGTCGTGCCCTTGCGCCTGCCGCCCTTGCGTGACCGTGCCGAGGACATTCCAGACCTCGTGCGACACTTCATCCAGCAGGCGGAAAAGGAAGGGCTCGGCACCAAGCGTTTCGACCATGAGGCGCTGGAGCTGATGAAGGCCTATCCTTGGCCCGGAAACGTGCGCGAGTTGGAAAACCTCATCCGCCGTCTGATGGCGCTCTATCCGCAGGATATCATCAGCCGCGAGATCATCGAGGCCGAACTGCGCAACGACGTCCCCGACAGTCCAATCGAAAAGGGCGTGGTGCGGACCGGGTCCGTCACCATCGCCCAGGCGGTGGAAGAGAACATGCGCGCCTATTTCGCCAGCTTCGGCGACAAGCTGCCGCCATCCGGCCTCTATGAGCGTGTCCTCGGCGAAATGGAGTATCCGCTGATCCTGGCGGCGCTGACGGCCACGCGCGGAAACCAGATCAAAGCCGCCGATCTGCTCGGCCTGAACCGCAACACGCTGCGCAAGAAGATTCGCGAGCTTGGCGTCTCCGTGTATCGCAGTTCCCGCACAGCTTGA
PROTEIN sequence
Length: 484
MTATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWISAGEGDLVVTDVVMPDENAFDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIAIIGRALSEPKRRPAKLEDESQDGMPLVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQARSTGRFEQAEGGTLFLDEIGDMPMDAQTRLLRVLQQGEYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLNVVPLRLPPLRDRAEDIPDLVRHFIQQAEKEGLGTKRFDHEALELMKAYPWPGNVRELENLIRRLMALYPQDIISREIIEAELRNDVPDSPIEKGVVRTGSVTIAQAVEENMRAYFASFGDKLPPSGLYERVLGEMEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIRELGVSVYRSSRTA*