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SCNpilot_expt_1000_bf_scaffold_2579_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(5278..6078)

Top 3 Functional Annotations

Value Algorithm Source
ntrB; nitrogen regulation (two-component sensor histidine kinase) protein; K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 269.0
  • Bit_score: 470
  • Evalue 3.60e-130
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 269.0
  • Bit_score: 470
  • Evalue 1.60e-129
Nitrogen regulation (Two-component sensor histidine kinase) protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I004_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 269.0
  • Bit_score: 470
  • Evalue 1.20e-129

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
GTGGTCATCGTCTTCCAGGAACGCTCGATGGCCGACAAGATCGACCGCCAGCTCACCCATCGCGCCGCCGCGCGCTCGGTGACGGGGCTGGCCTCGATGCTGGCGCATGAGATCAAGAATCCGCTGTCGGGCATTCGCGGCGCCGCCCAGCTTCTCGAAAGCGCCGTCGCGGGCGAGGACCGGTCGCTGACCCGGCTGATCTGCGAGGAAACCGACCGCATCGTCTCGCTGGTCGATCGCATGGAGGTGTTTTCCGACGAGCGACCGGTCGATCGCCAGCCGATCAACATCCACGCGGTGCTCGATCATGTGAAGGCGGTGGCCAAGGCCGGTTTTGCTCGCGATATCAAGATCGTCGAGAATTACGATCCGTCGCTGCCTTCGGTCCATGCCAATCGCGACCAACTCATACAGGTCTTCCTCAATCTGGTGAAGAACGCGGCGGAAGCGGTCGGCAACCGGCCGGATGGCGAGATCGTCCTGACGACGGCCTATCGTCCCGGTATCCGTCTGTCTGTCGCCGGTACGCGGGAAAAGATTTCGCTGCCGTTGGAGTTCTGTGTGCATGACAACGGTCCTGGCGTGCCCGCCGACCTGTTGCCGCATCTTTTCGATCCCTTCATCACCACCAAGACCAACGGCTCCGGCCTTGGCCTTGCGCTGGTCGCGAAGATCATCGGCGCCCATGGCGGCATCGTCGAATGCGACAGCCAGAACCACCGCACCACCTTCCGCGTGCTGATGCCGGCCCACAAGGATGCCGCGCTCGAAGATTCAAGCCCCACAGGAACCCATCGATGA
PROTEIN sequence
Length: 267
VVIVFQERSMADKIDRQLTHRAAARSVTGLASMLAHEIKNPLSGIRGAAQLLESAVAGEDRSLTRLICEETDRIVSLVDRMEVFSDERPVDRQPINIHAVLDHVKAVAKAGFARDIKIVENYDPSLPSVHANRDQLIQVFLNLVKNAAEAVGNRPDGEIVLTTAYRPGIRLSVAGTREKISLPLEFCVHDNGPGVPADLLPHLFDPFITTKTNGSGLGLALVAKIIGAHGGIVECDSQNHRTTFRVLMPAHKDAALEDSSPTGTHR*