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SCNpilot_expt_1000_bf_scaffold_2579_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(6417..7436)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 339.0
  • Bit_score: 506
  • Evalue 3.40e-140
tRNA-dihydrouridine synthase n=1 Tax=Rhizobium sp. CF142 RepID=J1T586_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 339.0
  • Bit_score: 506
  • Evalue 2.40e-140
nifR; tRNA-dihydrouridine synthase similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 339.0
  • Bit_score: 500
  • Evalue 3.20e-139

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGAACTGCTCGAAAGATAATCATTTGAGCTTCAACTTTCTGGAAACACCCCTTGAAATCGGCGGGGTCGCTCTGCGCAACCGCGTGATCCTGGCGCCGATGTCCGGCGTTACCGATCTGCCTTTCCGGCAATTGGCCTGGCGCTATGGCGCCGGCCTCGTGGTCACCGAAATGGTGGCCAGCCGAGAGCTGGTCGGCAATGCCCATGAATCCTGGGCGCGCTTGAAAAGCATGGGCCTCAAGCCGCATATGGTGCAGCTTGCCGGCCGCGAGGCGCGCTGGATGGGTGAGGCGGCAAGGATCGTTGCCGACAATGGCGCCGATATCATTGACATCAACATGGGCTGTCCCGCCAAGAAGGTGACCGGCGGTTATTCCGGCGCGGCGCTGATGCGCGATCCCGATCTCGCTCTTTCGCTTGTCGAGGCGACGGTCGCCGCCGTCTCCGTTCCGGTGACCGTGAAGATGCGGCTCGGTTGGGACGAGAATTCGCTGAATGCGCCCGAGATTGCCCGCCGCGCGGTGGAGGCTGGCGCCGCGGCCATCACCGTACATGGCCGCACCCGCATGCAATTCTACGAGGGGCGGGCGGATTGGGATGCGATCCGCGCCGTGCGGGAGGTCGTATCCGTGCCTCTCATCGCCAACGGCGATGTCGATAGCCGTGAGGATGCGCTCGAGATTCTGCGCCGCTCCGGCGCCGATGCCGTCATGGTCGGCCGGGCTTCTCAGGGGCGGCCCTGGCATGCCGGCTGGCTGGCTGGCCATGCCGCACCGGGACGGCGGGAGATCGCCGTCATCGCGGTCGCCCATTACCGCGCCATGCTGGAGTTCTACGGCGAAACGGTTGGCGTTCGCCACGCGCGAAAACATCTCGATTGGTATCTGCAACGCTTTGCGCCCGGTCTTGCCGGCGAGGACAAGGCTGAGCTCCTGACCTGCCGCGAGCCGGATGTGGTCTGCGAACGCCTGTCGGTCGCACTCGAGGCCGGCGCAAACCCGGAAAGGGATGCAGCATGA
PROTEIN sequence
Length: 340
MNCSKDNHLSFNFLETPLEIGGVALRNRVILAPMSGVTDLPFRQLAWRYGAGLVVTEMVASRELVGNAHESWARLKSMGLKPHMVQLAGREARWMGEAARIVADNGADIIDINMGCPAKKVTGGYSGAALMRDPDLALSLVEATVAAVSVPVTVKMRLGWDENSLNAPEIARRAVEAGAAAITVHGRTRMQFYEGRADWDAIRAVREVVSVPLIANGDVDSREDALEILRRSGADAVMVGRASQGRPWHAGWLAGHAAPGRREIAVIAVAHYRAMLEFYGETVGVRHARKHLDWYLQRFAPGLAGEDKAELLTCREPDVVCERLSVALEAGANPERDAA*