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SCNpilot_expt_1000_bf_scaffold_2579_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 7584..8783

Top 3 Functional Annotations

Value Algorithm Source
ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 398.0
  • Bit_score: 595
  • Evalue 1.50e-167
Bifunctional enzyme IspD/IspF n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V7S2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 403.0
  • Bit_score: 596
  • Evalue 2.70e-167
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 403.0
  • Bit_score: 596
  • Evalue 3.80e-167

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCCAGCGGAAGCTCCTTTCTCCATCGGCGTCGTGATTGTCGCCGCCGGGCGCGGCGAACGCGCAGGCGCGCCACAGGACGGGCCGAAACAATACCGCTTCATCGGCGGACGACCGGTGATCGCCCATACGCTGGATTGTTTCCGCAGATGGCGCCTGCCGGTTTCCGTCTGCATCGTCATCCATCCCGATGACGAATGCCTGCTGGCCCAGGCTGTTCCCAAGCGCGACGATGTCGCCGTGGTGTATGGCGGGACGACCCGGCAGCAATCGGTGCTGAACGGCTTGCGGCATTTTTCCGACGCCGGCATCGGCCATGTGATGATCCAGGATGCCGTGCGCCCCTTCATCGACCACGCCCTGCTCGACCGGGTGGTGAACGCCTTCGAGGCCGGCGCCATCGGCGTTCTGCCAGCCATTCCGGTTACAGACACGCTGAAGCGCGGCGACGCGCGGGGCCAGGTGATCGAGACGGTGCCGCGCGCCGGGCTTTATGCGGCGCAGACGCCGCAGTCCTTCCGCTTCGCCGAGATTCTCGATGCGCATGAGAAGGCGGCGTTGGCCGGTCATGCCGGCTTCACCGATGACGCCTCCATCGCCGAATGGGCCGGGCTACCGGTAACCCTTATCGCCGGCATGCCGGACAATGTAAAACTGACTGTGAAACGGGATATCGACATGGCCGACGAAAAGCTTTCCGCCCACCTGCCGGATGTGCGCACCGGCAACGGTTACGACGTCCACCAGTTGGAGCCGGGGGACGGTGTGACGCTGTGCGGCATCTTCATTCCGCATGATCAGCGGCTCAAGGGCCATTCCGATGCCGACGTCGCGCTTCACGCGCTGACCGACGCGCTGCTTGCCACCTGCGGCGCAGGCGATATCGGCGACCATTTCCCACCCTCCGATCCGCAATGGCGGGGTGCGGCGTCACGCATCTTTCTCGAACATGCGGCCGGTATCGTCCGCGAAAAGGGCGGCACGATCATGAATGCCGATGTCTCCTTGATCGCCGAGGCCCCGAAGATCGGGCCGCATCGCGACGCCATGCGCGCCAATCTCGCCGACATGCTGAAGATCGACCTCGAACGCTGCTCGGTGAAGGCAACCACCAACGAGACCATCGGCTTCATCGGCCGCCGTGAAGGCATCGCGGCGATCGCCACCGCCACCGTCGTCTATGGAAGGAAAAGCGCATGA
PROTEIN sequence
Length: 400
MPAEAPFSIGVVIVAAGRGERAGAPQDGPKQYRFIGGRPVIAHTLDCFRRWRLPVSVCIVIHPDDECLLAQAVPKRDDVAVVYGGTTRQQSVLNGLRHFSDAGIGHVMIQDAVRPFIDHALLDRVVNAFEAGAIGVLPAIPVTDTLKRGDARGQVIETVPRAGLYAAQTPQSFRFAEILDAHEKAALAGHAGFTDDASIAEWAGLPVTLIAGMPDNVKLTVKRDIDMADEKLSAHLPDVRTGNGYDVHQLEPGDGVTLCGIFIPHDQRLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWRGAASRIFLEHAAGIVREKGGTIMNADVSLIAEAPKIGPHRDAMRANLADMLKIDLERCSVKATTNETIGFIGRREGIAAIATATVVYGRKSA*