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SCNpilot_expt_1000_bf_scaffold_1689_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(179..1258)

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYG3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 359.0
  • Bit_score: 603
  • Evalue 1.50e-169
Ribose/xylose/arabinose/galactoside ABC-type transport system permease component {ECO:0000313|EMBL:EYR82496.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 359.0
  • Bit_score: 603
  • Evalue 2.20e-169
sugar ABC transporter; K02057 simple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 347.0
  • Bit_score: 478
  • Evalue 2.40e-132

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGTCACGGGCGCCTATGAGACGCTTCGCCATGCTGGTTGACACGCCCTATATCCCTGCCTCCGCACTCGAAGTCGAGGCCCAGAAGGCATTCGAACCGCCAGGCGCAGGCCCGACCTTCGGCCGCCGCTTTGCCACGCTGGCGCTGCGTGGCGGGGCGCTCGCCGTCTTCCTCGGCGTTCTCATCGTCTTCTCCGTCACTGCGCCGTTCTTCCTCACGGTCGGCAATATCGGCAACGTGCTCGGCCAGTCGGCCATAGCGGGCGTGCTGGCCATCGGGCTCACCATCGTCATCATCGCCGGCGGCTCGAACGTCGTGACGGGCGGCATCGACCTGTCGCTGGCCGCCAATATGGGCCTCAGCGCCGCCGTCTATGCCACGCTGGCGCAGGCGGGACATGGCGATGGTGTCGCGATTGCCGGCGCGCTCGGCACGGGACTCGCCATTGGCGCGGTCAATGCCGCCGCCGTCACGCTTGCGGGTATCGTGCCGCTGCTGGCGACGCTTGCCGTCATGAACGTCGTCGCCGGCCTCGAACTGGTGCTGACGCAGAATACCGTCGTCCCCGCATCGGGCGCGTTCCTCTCGACGCTTTCGGCCGGCGGCCCGTTCGGCATTCCCGTGCTCGCCTACCTCCTTCTCGGCTTCACGCTCGCCGTCGCCGCCATCGTGCAGTACACGCCGCTCGGCCTGCGCCTCTACGCGGTCGGCGCATTCCCGGATGCGGCGCGGGCGGCGGGCCTGCCCGTCAAGACCTTCGTTGCCGGCTCGTTCCTGGCAAGCGGCCTGTGCGGGGGGCTCGCCGGCATCCTTTCGGTCTCCTACCTTTCGGGCAGCACCACCGGGGCCGGCGACATGCTGCTGCCGGTCGTCGTCACCGCCCTGCTCGGCACGGTCTTTTCCCGCCGGCTGGTGCCGACAATCACCGGCACGTTGCTGTCGGTGCTTTTCGTCGGCTTCCTCATCAACGGCTTCCAGCTTCTCAACATTTCCAGCACGCTGGTCAGCGGCGTGCAGGGACTGCTGATCCTGCTGGTCGTTTCCGCCACCACGGTGCTCGGCCGCAAGGAGAATGTCTGA
PROTEIN sequence
Length: 360
MSRAPMRRFAMLVDTPYIPASALEVEAQKAFEPPGAGPTFGRRFATLALRGGALAVFLGVLIVFSVTAPFFLTVGNIGNVLGQSAIAGVLAIGLTIVIIAGGSNVVTGGIDLSLAANMGLSAAVYATLAQAGHGDGVAIAGALGTGLAIGAVNAAAVTLAGIVPLLATLAVMNVVAGLELVLTQNTVVPASGAFLSTLSAGGPFGIPVLAYLLLGFTLAVAAIVQYTPLGLRLYAVGAFPDAARAAGLPVKTFVAGSFLASGLCGGLAGILSVSYLSGSTTGAGDMLLPVVVTALLGTVFSRRLVPTITGTLLSVLFVGFLINGFQLLNISSTLVSGVQGLLILLVVSATTVLGRKENV*