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SCNpilot_expt_1000_bf_scaffold_1689_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1218..1379)

Top 3 Functional Annotations

Value Algorithm Source
Ribose import ATP-binding protein RbsA {ECO:0000313|EMBL:EYR82495.1}; EC=3.6.3.17 {ECO:0000313|EMBL:EYR82495.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.5
  • Coverage: 53.0
  • Bit_score: 98
  • Evalue 3.40e-18
sugar ABC transporter; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 53.0
  • Bit_score: 76
  • Evalue 4.00e-12
Ribose import ATP-binding protein RbsA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D280_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 53.0
  • Bit_score: 98
  • Evalue 2.40e-18

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 162
GTGCTTTCCTCCGATATCGAGGAACTGCTCGGCGTCACCGATCGCGTTCTCGTCTTCTTCCGCGGTCGCGTCACGCGGCAGTTCATTTCCTCCGAAACGAGCCCGGACGAGGTCCTTGCCGATGTCACGGGCGCCTATGAGACGCTTCGCCATGCTGGTTGA
PROTEIN sequence
Length: 54
VLSSDIEELLGVTDRVLVFFRGRVTRQFISSETSPDEVLADVTGAYETLRHAG*