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SCNpilot_expt_1000_bf_scaffold_1689_curated_19

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 18480..19133

Top 3 Functional Annotations

Value Algorithm Source
Anti-sigma-E factor ChrR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EH08_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 217.0
  • Bit_score: 383
  • Evalue 2.00e-103
Anti-sigma-E factor ChrR {ECO:0000313|EMBL:EYR77964.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 217.0
  • Bit_score: 383
  • Evalue 2.80e-103
transcriptional regulator; K07167 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 215.0
  • Bit_score: 241
  • Evalue 2.20e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGACCATTTCACATCACGCAACCGACGAGACATTGATGCGCTACGCCGCCGGCGCTCTTGCCGCCGCGCCCGCCGTTGTCGTGACGGCGCATCTGGCGGGCTGCCCCGTCTGTCGCGCCCGCGTCGGCGAGTACGAGGCGCTCGGCGGGGCGCTGCTGGAGGGGACGGAGCCGACGCAGATGTCGGCGACCGCCCTCAACGACACGCTCGCCATGCTCGACGACGAGGACGCCGCCGCGCCCTTCGCGCCGCCGCCGCTGGCGCCCGTGGAAATCGAGGGCGTTCGCCTGCCGGACGCTCTCAGGGGCTGCGATATCGGACGCTGGCGCTGGATCGGACCTGGCATGAAGATGAGCCGGGTCGGCGTGCCCGAAGATCCGGAGGCCAATCTCATCCTGTTGAAGGTCGGCCCCGGCCGCGCCCTGCCCGACCACGGGCATGTCGGCACCGAGTTCACCTATATCATATCGGGATCGTTCTCCGACCGTTTCGGCACCTTCCGCCCCGGCGATCTGGCCGAGATGGACGACGACGTGGAGCATCAGCCGGTCGTCGACAAGGACGGCGAATGCATCTGCCTTGCCGCCCTGGAAGGAAGGATGCGCTTCAAGAACGTCATCGGCCGCATGCTGCAGCCGATCTTCGGGATTTGA
PROTEIN sequence
Length: 218
MTISHHATDETLMRYAAGALAAAPAVVVTAHLAGCPVCRARVGEYEALGGALLEGTEPTQMSATALNDTLAMLDDEDAAAPFAPPPLAPVEIEGVRLPDALRGCDIGRWRWIGPGMKMSRVGVPEDPEANLILLKVGPGRALPDHGHVGTEFTYIISGSFSDRFGTFRPGDLAEMDDDVEHQPVVDKDGECICLAALEGRMRFKNVIGRMLQPIFGI*