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SCNpilot_expt_1000_bf_scaffold_1642_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 6948..7157

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein n=1 Tax=Rhizobium sp. CF142 RepID=J1ST51_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 69.0
  • Bit_score: 116
  • Evalue 1.50e-23
Cold shock protein {ECO:0000313|EMBL:EJJ28438.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 69.0
  • Bit_score: 116
  • Evalue 2.00e-23
cold shock-like protein cspA; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 69.0
  • Bit_score: 114
  • Evalue 1.30e-23

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGAACACAGGCACCGTAAAGTTTTTTAACGGCACCAAGGGTTTCGGCTTCATCGCCCCGAACGATGGCGGCAACGACGTATTCGTGCATATCACTGCTGTCGAGCGCGCCGGCCTTCGCTCGCTTAGCGAAGGGCAGACCGTGCAGTACGATCTCGTACAGGATCGTCGCTCGGGCAAGTATGCCGCAGACAATCTGCGCGCTGCTTGA
PROTEIN sequence
Length: 70
MNTGTVKFFNGTKGFGFIAPNDGGNDVFVHITAVERAGLRSLSEGQTVQYDLVQDRRSGKYAADNLRAA*