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SCNpilot_expt_1000_bf_scaffold_1642_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 7285..7530

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S21 n=1 Tax=Rhizobium sp. RepID=L0NF12_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 81.0
  • Bit_score: 140
  • Evalue 6.40e-31
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 79.0
  • Bit_score: 141
  • Evalue 6.90e-31
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 81.0
  • Bit_score: 140
  • Evalue 2.60e-31

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
TTGCAAGTTCTCGTCAGGGACAACAACGTCGATCAAGCCCTCCGCGTTTTGAAAAAGAAAATGCAGAGAGAAGGGCTTTTCCGGGAAATGAAGGCACGGAGCGCTTATGAAAAGCCTTCCGAAAAGAGAGCGCGGGAAAAAGCCGAGGCCGTCCGGCGCACCCGGAAGCTGGCCCGCAAGAAGGCGCAGCGCGAGGGGCTCCTGCCCGCTCCCAAGAAGAAGCCGCTGCCAGGCCGGGCGAAGTGA
PROTEIN sequence
Length: 82
LQVLVRDNNVDQALRVLKKKMQREGLFREMKARSAYEKPSEKRAREKAEAVRRTRKLARKKAQREGLLPAPKKKPLPGRAK*