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SCNpilot_cont_500_bf_scaffold_482_curated

Search features with annotation key words

Displaying items 31-60 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_482_curated_29
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26702..27499)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EKE6_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ36640.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_500_bf_scaffold_482_curated_30
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27520..28215)
DNA (696bp) protein (232aa)
Demethylmenaquinone methyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PE44_9RHOB
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EJW10082.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
demethylmenaquinone
SCNpilot_cont_500_bf_scaffold_482_curated_31
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28228..28785)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZY55_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHM02069.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_482_curated_32
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28782..29516)
DNA (735bp) protein (245aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH1
7-cyano-7-deazaguanine synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J6IXY2_9RHOB
exsB; ExsB protein; K06920 queuosine biosynthesis protein QueC
SCNpilot_cont_500_bf_scaffold_482_curated_33
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29519..30334)
DNA (816bp) protein (272aa)
2,5-didehydrogluconate reductase (EC:1.1.1.274); K05885 2,5-diketo-D-gluconate reductase [EC:1.1.1.274]
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:ABE63222.1}; EC=1.1.1.274 {ECO:0000313|EMBL:ABE63222.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
2,5-didehydrogluconate reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKM5_NITHX
SCNpilot_cont_500_bf_scaffold_482_curated_34
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30561..30899
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUW7_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI72196.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_500_bf_scaffold_482_curated_35
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30912..31736
DNA (825bp) protein (275aa)
iron permease n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003746EAA
Uncharacterized protein {ECO:0000313|EMBL:CCE09057.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
iron permease FTR1
SCNpilot_cont_500_bf_scaffold_482_curated_36
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31749..32036)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PH59_9BRAD
XRE family transcriptional regulator {ECO:0000313|EMBL:ETR75503.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
helix-turn-helix type 3; K07726 putative transcriptional regulator
SCNpilot_cont_500_bf_scaffold_482_curated_37
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32117..33292)
DNA (1176bp) protein (392aa)
isovaleryl-CoA dehydrogenase; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Isovaleryl-CoA dehydrogenase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I9U5_AZOC5
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:BAF88831.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_482_curated_38
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33483..34274
DNA (792bp) protein (264aa)
Polysaccharide deacetylase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMR2_XANP2
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:ABS69305.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_482_curated_39
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34540..35367
DNA (828bp) protein (276aa)
Polysaccharide deacetylase n=2 Tax=Oligotropha carboxidovorans RepID=B6JF60_OLICO
Polysaccharide deacetylase {ECO:0000313|EMBL:KIZ39158.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
polysaccharide deacetylase
SCNpilot_cont_500_bf_scaffold_482_curated_40
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35371..36525)
DNA (1155bp) protein (385aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JUM6_HYPDA
chromate transporter; K07240 chromate transporter
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_500_bf_scaffold_482_curated_trna_2
unknown

Not on your lists

comp(36715..36796)
DNA (82bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_482_curated_41
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(36916..37158)
DNA (243bp) protein (81aa)
Flagellar motor switch protein FliN n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCE8_9BRAD
Flagellar motor switch protein FliN {ECO:0000313|EMBL:KIJ70990.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
hypothetical protein; K02417 flagellar motor switch protein FliN/FliY
SCNpilot_cont_500_bf_scaffold_482_curated_42
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37268..38002
DNA (735bp) protein (245aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VCP3_RHOPX
SCNpilot_cont_500_bf_scaffold_482_curated_43
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37999..38310)
DNA (312bp) protein (104aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7Q0_9BRAD
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_482_curated_44
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38307..38753)
DNA (447bp) protein (149aa)
AIG2 family protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CL03_9RHIZ
AIG2 family protein {ECO:0000313|EMBL:EIZ84185.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
AIG2 family protein
SCNpilot_cont_500_bf_scaffold_482_curated_45
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38799..40832)
DNA (2034bp) protein (678aa)
propionyl-coenzyme A carboxylase, alpha polypeptide; K01965 propionyl-CoA carboxylase alpha chain [EC:6.4.1.3]
Acetyl-CoA carboxylase, biotin carboxylase subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IB15_9BRAD
Propionyl-coenzyme A carboxylase, alpha polypeptide {ECO:0000313|EMBL:EJZ33115.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_500_bf_scaffold_482_curated_46
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41093..41752
DNA (660bp) protein (220aa)
Peroxiredoxin protein {ECO:0000313|EMBL:AJD45011.1}; EC=1.11.1.15 {ECO:0000313|EMBL:AJD45011.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
thioredoxin peroxidase AhpC (EC:1.11.1.15)
Thioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RTD7_9BRAD
SCNpilot_cont_500_bf_scaffold_482_curated_47
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41840..42241
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XS89_PARAH
Phenylacetic acid degradation protein {ECO:0000313|EMBL:KGJ16422.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_482_curated_48
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42263..43708
DNA (1446bp) protein (482aa)
deoxyribodipyrimidine photolyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photo-lyase type I {ECO:0000313|EMBL:ABE40324.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ABE40324.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Deoxyribodipyrimidine photo-lyase type I n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135B5_RHOPS
SCNpilot_cont_500_bf_scaffold_482_curated_49
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43705..44598)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q135B3_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40326.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_482_curated_50
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44730..45857
DNA (1128bp) protein (376aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
adhI; S-(hydroxymethyl)glutathione dehydrogenase AdhI (EC:1.1.1.1 1.1.1.284); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
Alcohol dehydrogenase class-3 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NB84_AFIFE
SCNpilot_cont_500_bf_scaffold_482_curated_51
unknown

Not on your lists

45935..46270
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_482_curated_52
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46350..46754)
DNA (405bp) protein (135aa)
cupin n=1 Tax=Bradyrhizobium japonicum RepID=UPI000376832A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAE27032.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_500_bf_scaffold_482_curated_53
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46826..47248)
DNA (423bp) protein (141aa)
Globin n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UPW9_METS4
globin
Globin {ECO:0000313|EMBL:ACA15168.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_500_bf_scaffold_482_curated_54
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47271..48743)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SK43_9BRAD
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KFC75481.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
SCNpilot_cont_500_bf_scaffold_482_curated_55
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49246..49692)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003791E84
hypothetical protein; K08983 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AEC22196.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_500_bf_scaffold_482_curated_56
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49713..50345)
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Bradyrhizobiaceae RepID=K8PH99_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS38915.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_482_curated_57
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50508..50945)
DNA (438bp) protein (146aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VL10_RHOPX
Displaying items 31-60 of 107 in total

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