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SCNpilot_cont_500_bf_scaffold_554_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(13647..14558)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAS6_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 293.0
  • Bit_score: 506
  • Evalue 1.70e-140
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 293.0
  • Bit_score: 506
  • Evalue 2.30e-140
rpoH; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 298.0
  • Bit_score: 501
  • Evalue 2.20e-139

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCCCGTAATGCCGTTATTCCGGCTCTCAAAGCCGAATCCGGTCTGTCGCACTATCTCGACGAAATCCGCCGGTTTCCGATGCTGGAGCCGCAGGAGGAGTACATGCTCGCCAAGAGCTGGCGTGAGCATGGCGATCGGGATGCCGCGCACAGGCTGGTGACCAGCCATCTGCGGCTCGTGGCGAAGATCGCCATGGGCTATCGCGGCTATGGCCTGCCGATCTCCGAGGTCGTGTCGGAAGGCAATGTCGGTCTGATGCAGGCGGTGAAGCGGTTCGAGCCCGAGAAGGGCTTCCGCCTTGCCACCTATGCCATGTGGTGGATCAAGGCGGCGATACAAGAATACATCCTGCGCTCGTGGTCGCTCGTGAAGATGGGCACGACCGCGAACCAGAAGAAGCTGTTCTTCAACCTGCGCAAGGCGAAGAGCAAAATCTCCGCGCTCGACGAAGGTGATCTGCGCCCCGATCAGGTGTCGCTGATCGCCAAGCGTCTCGGCGTGACGGAGAAGGACGTCGTCGACATGAACCGCCGGCTCGGCGGTGACGCGTCGCTCAACGCCCCGATCCGCGAGGAAGGCGACAGCGGCGAGTGGCAGGATTGGCTGGTCGACGATGCGCCCAGTCAGGAACGCATTCTCGCCGAGAGCGAAGAACTCGACAACCGCCACAAGGCACTGACCAAGGCGCTCGGCGTGCTCAACGATCGTGAACGGCGCATCTTCGAGGCGCGCCGCCTCGCCGACGATCCGATCACGCTCGAGGAACTGGCGGCCGAGTTCGGCGTGTCGCGCGAGCGCGTACGTCAGATCGAGGTGCGGGCGTTCGAGAAGGTGCAGGCCGCGGTGAAGACCGGGGTCGCGGCGATGGAGAAGCCGCCAGCCGAGCCGGCAGCCCTCGCCGCGCACTGA
PROTEIN sequence
Length: 304
MARNAVIPALKAESGLSHYLDEIRRFPMLEPQEEYMLAKSWREHGDRDAAHRLVTSHLRLVAKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKAAIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLRPDQVSLIAKRLGVTEKDVVDMNRRLGGDASLNAPIREEGDSGEWQDWLVDDAPSQERILAESEELDNRHKALTKALGVLNDRERRIFEARRLADDPITLEELAAEFGVSRERVRQIEVRAFEKVQAAVKTGVAAMEKPPAEPAALAAH*