ggKbase home page

SCNpilot_cont_500_bf_scaffold_554_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(14776..15801)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 342.0
  • Bit_score: 424
  • Evalue 1.30e-115
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 333.0
  • Bit_score: 401
  • Evalue 2.00e-109
Pseudouridine synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J6L9W2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 342.0
  • Bit_score: 424
  • Evalue 9.30e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1026
ATGGCCGAAGAAACGGCTGATACCGTAGAAGTGGAGATCGGCGCCAGCGATTCCGGCGGCCGGCTCGACCGCGTGCTGGCCGGTCTGCTCGGCGCCGGGCCGGAAGGTTTGTCGCGCTCCCGCCTGAAGACACTGATCGAAACCGGCGACGTCTCGATCGATGGCCGCACGATCCGCGATCCGAGCCATCGCGTCAATTCCGGGCAAAAAGTCACGGTCGCCATTCCGCCCGCCGAAGACGCCGTGCCGCAGGGCGAAGCGATTCCGCTCAACGTCGTGTTCGAGGACGATCAGGTGATCGTCATCGACAAGCCGCCGGGCCTCGTCGTGCATCCCGCCGCCGGTCATCAGACCGGCACGCTGGTCAATGCGCTGATCGCCCATTGCGGCGCATCACTGTCAGGCATCGGCGGCGTCAAGCGGCCGGGCATCGTCCATCGTCTCGACAAGGACACCAGCGGTCTGATGGTAGCGGCGAAGACCGACCGCGCGCACCGTAAACTCGCGGCGCAATTCGCCGACAAGAGCGATGGCCGTGCCTACCGCGCCTATCTGGCCCTGGTCTGGGGCGCACCCAAGCTGCCGAGCGGTACGGTCGACGCGCCGATCGGTCGGCATGCCCATGCCCGCGAGCGCCAGGCGATCCGCAAGGACGGCCGCGAGGCCGTGACCCATTGGCGGGTGCTGGAGCGCTATGTCGATGCCGGCAATCGACCGGTGGCCTCGTTGCTCGAATGCCGGCTGGAAACCGGCCGCACGCACCAGATCCGCGTCCACCTCGCCCATATCGGCCACCCGATCATGGGCGACGAAACCTACGCGACCGGGTTCAAGACCAAGGTCGCGCGCCTGCCGGAGCCGGCGAGAATCGGGCTCGAGGCCCTTGGAAGACAGGCGCTCCATGCATATGTGCTGGGCTTCGATCATCCGACCACGGGCGAATCCCTGGAGTTCCATTCGGAACTACCGGCGGATATCGCTCGTTTACGCATGGGACTTGGTGCTCCGGTCGTAAAACCTGCCTGA
PROTEIN sequence
Length: 342
MAEETADTVEVEIGASDSGGRLDRVLAGLLGAGPEGLSRSRLKTLIETGDVSIDGRTIRDPSHRVNSGQKVTVAIPPAEDAVPQGEAIPLNVVFEDDQVIVIDKPPGLVVHPAAGHQTGTLVNALIAHCGASLSGIGGVKRPGIVHRLDKDTSGLMVAAKTDRAHRKLAAQFADKSDGRAYRAYLALVWGAPKLPSGTVDAPIGRHAHARERQAIRKDGREAVTHWRVLERYVDAGNRPVASLLECRLETGRTHQIRVHLAHIGHPIMGDETYATGFKTKVARLPEPARIGLEALGRQALHAYVLGFDHPTTGESLEFHSELPADIARLRMGLGAPVVKPA*